ID K9YLR7_CYASC Unreviewed; 398 AA.
AC K9YLR7;
DT 06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT 06-MAR-2013, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE SubName: Full=Transposase, IS605 OrfB family {ECO:0000313|EMBL:AFZ47809.1};
GN OrderedLocusNames=Cyast_1854 {ECO:0000313|EMBL:AFZ47809.1}, Cyast_2437
GN {ECO:0000313|EMBL:AFZ48383.1};
OS Cyanobacterium stanieri (strain ATCC 29140 / PCC 7202).
OC Bacteria; Cyanobacteriota; Cyanophyceae; Oscillatoriophycideae;
OC Chroococcales; Geminocystaceae; Cyanobacterium.
OX NCBI_TaxID=292563 {ECO:0000313|EMBL:AFZ47809.1, ECO:0000313|Proteomes:UP000010483};
RN [1] {ECO:0000313|EMBL:AFZ47809.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=PCC 7202 {ECO:0000313|EMBL:AFZ47809.1};
RG US DOE Joint Genome Institute;
RA Gugger M., Coursin T., Rippka R., Tandeau De Marsac N., Huntemann M.,
RA Wei C.-L., Han J., Detter J.C., Han C., Tapia R., Held B., Chen A.,
RA Krypides N., Mavromatis K., Markowitz V., Szeto E., Ivanova N.,
RA Mikhailova N., Pagani I., Pati A., Goodwin L., Peters L., Pitluck S.,
RA Woyke T., Kerfeld C.;
RT "Finished genome of Cyanobacterium stanieri PCC 7202.";
RL Submitted (APR-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000010483}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 29140 / PCC 7202 {ECO:0000313|Proteomes:UP000010483};
RX PubMed=23277585; DOI=10.1073/pnas.1217107110;
RA Shih P.M., Wu D., Latifi A., Axen S.D., Fewer D.P., Talla E., Calteau A.,
RA Cai F., Tandeau de Marsac N., Rippka R., Herdman M., Sivonen K.,
RA Coursin T., Laurent T., Goodwin L., Nolan M., Davenport K.W., Han C.S.,
RA Rubin E.M., Eisen J.A., Woyke T., Gugger M., Kerfeld C.A.;
RT "Improving the coverage of the cyanobacterial phylum using diversity-driven
RT genome sequencing.";
RL Proc. Natl. Acad. Sci. U.S.A. 110:1053-1058(2013).
CC -!- SIMILARITY: In the C-terminal section; belongs to the transposase 35
CC family. {ECO:0000256|ARBA:ARBA00008761}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the transposase 2
CC family. {ECO:0000256|ARBA:ARBA00011044}.
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DR EMBL; CP003940; AFZ47809.1; -; Genomic_DNA.
DR EMBL; CP003940; AFZ48383.1; -; Genomic_DNA.
DR AlphaFoldDB; K9YLR7; -.
DR KEGG; csn:Cyast_1854; -.
DR KEGG; csn:Cyast_2437; -.
DR PATRIC; fig|292563.3.peg.1937; -.
DR eggNOG; COG0675; Bacteria.
DR HOGENOM; CLU_032903_1_1_3; -.
DR BioCyc; CSTA292563:G1353-1862-MONOMER; -.
DR Proteomes; UP000010483; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0032196; P:transposition; IEA:UniProtKB-KW.
DR InterPro; IPR010095; Cas12f1-like_TNB.
DR InterPro; IPR001959; Transposase.
DR NCBIfam; NF040570; guided_TnpB; 1.
DR NCBIfam; TIGR01766; IS200/IS605 family accessory protein TnpB-like domain; 1.
DR PANTHER; PTHR30405; TRANSPOSASE; 1.
DR Pfam; PF01385; OrfB_IS605; 1.
DR Pfam; PF07282; OrfB_Zn_ribbon; 1.
PE 3: Inferred from homology;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000010483};
KW Transposition {ECO:0000256|ARBA:ARBA00022578}.
FT DOMAIN 164..279
FT /note="Probable transposase IS891/IS1136/IS1341"
FT /evidence="ECO:0000259|Pfam:PF01385"
FT DOMAIN 291..358
FT /note="Cas12f1-like TNB"
FT /evidence="ECO:0000259|Pfam:PF07282"
FT REGION 211..239
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 398 AA; 45657 MW; ED80430AC9B5EF13 CRC64;
MLVIEAKLYG NQPQDQKLDE MIRTASFVRN SCIRYWMDHK GVGQYDLSRL CKELASEFEW
AKKLNSMARQ ASAERAWASI KRFYDNCKNP SLKKKGYPKF KKGRSVEYKT TGWQLSKDGT
AINFRDGFKA GWFKMRGGFD LNFYQLNQIK RVRVIRRADG YYCQFCIDQE RQEDIKPSGN
AIGLDVGLSS FYTDSNGVKV NNPRHLRKSE KQLKRLQRKV SKKKKGSNSR KKAIKKLGRK
HLKVSRQRKD WLVKLARCVV SSNDVVAYEK LTVKNMVKNH CLAKSINDAS WRTFFDWLEY
YGKVMGKVVY GVNPQYTSQE CPHCKAIVKK TLSQRTHVCE CGCVMDRDEA GAINILAKAL
RELSRGGQSQ TSSLELVNAN GHINLCQLSE NLIDKLGG
//
