ID L0AFF7_NATGS Unreviewed; 434 AA.
AC L0AFF7;
DT 06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT 06-MAR-2013, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE SubName: Full=IS4 family transposase {ECO:0000313|EMBL:PLK19397.1};
DE SubName: Full=Transposase family protein {ECO:0000313|EMBL:AFZ71882.1};
GN OrderedLocusNames=Natgr_0634 {ECO:0000313|EMBL:AFZ71882.1};
GN ORFNames=CYV19_15255 {ECO:0000313|EMBL:PLK19397.1};
OS Natronobacterium gregoryi (strain ATCC 43098 / DSM 3393 / CCM 3738 / CIP
OS 104747 / IAM 13177 / JCM 8860 / NBRC 102187 / NCIMB 2189 / SP2).
OC Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Natrialbales;
OC Natrialbaceae; Natronobacterium.
OX NCBI_TaxID=797304 {ECO:0000313|EMBL:AFZ71882.1, ECO:0000313|Proteomes:UP000010468};
RN [1] {ECO:0000313|Proteomes:UP000010468}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2
RC {ECO:0000313|Proteomes:UP000010468};
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Mikhailova N., Teshima H., Detter J.C., Han C., Tapia R.,
RA Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Sproer C.,
RA Anderson I., Woyke T.;
RT "Complete sequence of Natronobacterium gregoryi SP2.";
RL Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AFZ71882.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=SP2 {ECO:0000313|EMBL:AFZ71882.1};
RG US DOE Joint Genome Institute;
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Mikhailova N., Teshima H., Detter J.C., Han C., Tapia R.,
RA Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Sproer C.,
RA Anderson I., Woyke T.;
RT "Complete sequence of Natronobacterium gregoryi SP2.";
RL Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:PLK19397.1, ECO:0000313|Proteomes:UP000234484}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SP2 {ECO:0000313|EMBL:PLK19397.1,
RC ECO:0000313|Proteomes:UP000234484};
RC TISSUE=Freeze-dried powder thallus {ECO:0000313|EMBL:PLK19397.1};
RA Jiang L., He B., Kang J., Yu M., Li N., Fang Y., Tang Z., Wu P., Yao P.,
RA Huang J.;
RT "The characterization of oligonucleotides binding to NgAgo.";
RL Submitted (DEC-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the transposase 11 family.
CC {ECO:0000256|ARBA:ARBA00010075}.
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DR EMBL; CP003377; AFZ71882.1; -; Genomic_DNA.
DR EMBL; PKKI01000053; PLK19397.1; -; Genomic_DNA.
DR AlphaFoldDB; L0AFF7; -.
DR STRING; 797304.Natgr_0634; -.
DR KEGG; nge:Natgr_0634; -.
DR eggNOG; arCOG06159; Archaea.
DR HOGENOM; CLU_042765_2_0_2; -.
DR Proteomes; UP000010468; Chromosome.
DR Proteomes; UP000234484; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0004803; F:transposase activity; IEA:InterPro.
DR GO; GO:0006313; P:DNA transposition; IEA:InterPro.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR047952; Transpos_IS4.
DR InterPro; IPR002559; Transposase_11.
DR NCBIfam; NF033592; transpos_IS4_1; 1.
DR PANTHER; PTHR33258; TRANSPOSASE INSL FOR INSERTION SEQUENCE ELEMENT IS186A-RELATED; 1.
DR PANTHER; PTHR33258:SF1; TRANSPOSASE INSL FOR INSERTION SEQUENCE ELEMENT IS186A-RELATED; 1.
DR Pfam; PF01609; DDE_Tnp_1; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 3: Inferred from homology;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000010468};
KW Transposable element {ECO:0000256|ARBA:ARBA00022464};
KW Transposition {ECO:0000256|ARBA:ARBA00022578}.
FT DOMAIN 116..352
FT /note="Transposase IS4-like"
FT /evidence="ECO:0000259|Pfam:PF01609"
SQ SEQUENCE 434 AA; 50208 MW; C856A2CFC7E9D177 CRC64;
MQSNPSSQEV KRYLTNFLPS EALEDHADAV GVVERDRKLQ IPPLVWSFAF GFAGGASRTL
ASFRRSYNST ADKTLSPGGF YQRLTPTLAE YLRDLVECGL DEVAVPHTVS EEFNRFRDVM
IADGTVLRLH KLLSEEYEGR REEQAGARLH LLHNVTEQTI DRFSVTDEKR HDSTQFETGS
WLEGRLAILD LAYFKYRRFA LIDENDGYFV SRLKRSSNPV VTDELREWSG RAIPLEGKKI
FDVVDDFCRK YIDVEVEIEF DRREYAGTQS RDMKRFRVVG VRNEDADDYH LYITNLSREE
FLPEDLATIY RCRWEAELLF RELKTQYRLD EFDTTKKHVV EILLYAALLS LVVSRELLSL
VIEHADDNLV FPPERWAATF RSHAQLILYR LSGYLGYSPP PLLDRLIADA QKIHKQRPVL
QEQLATAIKP AAEA
//
