ID   L0AYN6_THEEQ            Unreviewed;      1387 AA.
AC   L0AYN6;
DT   06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT   06-MAR-2013, sequence version 1.
DT   24-JAN-2024, entry version 44.
DE   RecName: Full=DNA damage-binding protein 1 {ECO:0008006|Google:ProtNLM};
GN   ORFNames=BEWA_032110 {ECO:0000313|EMBL:AFZ80358.1};
OS   Theileria equi strain WA.
OC   Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Piroplasmida;
OC   Theileriidae; Theileria.
OX   NCBI_TaxID=1537102 {ECO:0000313|EMBL:AFZ80358.1, ECO:0000313|Proteomes:UP000031512};
RN   [1] {ECO:0000313|EMBL:AFZ80358.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=WA {ECO:0000313|EMBL:AFZ80358.1};
RA   Kappmeyer L., Thiagarajan M., Herndon D., Caler E., Galinsky K., Inman J.,
RA   Schobel S., Amedeo P., Watkins K., Bradley B., Sosa J., Sarmiento M.,
RA   Fedorova N., Brayton K., Lau A., Nene V., Djikeng A., Herndon D.,
RA   Knowles D.;
RL   Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:AFZ80358.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=WA {ECO:0000313|EMBL:AFZ80358.1};
RX   PubMed=23137308; DOI=10.1186/1471-2164-13-603;
RA   Kappmeyer L.S., Thiagarajan M., Herndon D.R., Ramsay J.D., Caler E.,
RA   Djikeng A., Gillespie J.J., Lau A.O., Roalson E.H., Silva J.C., Silva M.G.,
RA   Suarez C.E., Ueti M.W., Nene V.M., Mealey R.H., Knowles D.P., Brayton K.A.;
RT   "Comparative genomic analysis and phylogenetic position of Theileria
RT   equi.";
RL   BMC Genomics 13:603-603(2012).
CC   -!- SIMILARITY: Belongs to the DDB1 family.
CC       {ECO:0000256|ARBA:ARBA00007453}.
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DR   EMBL; CP001669; AFZ80358.1; -; Genomic_DNA.
DR   RefSeq; XP_004830024.1; XM_004829967.1.
DR   STRING; 1537102.L0AYN6; -.
DR   EnsemblProtists; AFZ80358; AFZ80358; BEWA_032110.
DR   GeneID; 15803480; -.
DR   KEGG; beq:BEWA_032110; -.
DR   VEuPathDB; PiroplasmaDB:BEWA_032110; -.
DR   eggNOG; KOG1897; Eukaryota.
DR   OrthoDB; 226997at2759; -.
DR   Proteomes; UP000031512; Chromosome 1.
DR   GO; GO:0005634; C:nucleus; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   Gene3D; 1.10.150.910; -; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR   InterPro; IPR004871; Cleavage/polyA-sp_fac_asu_C.
DR   InterPro; IPR018846; Cleavage/polyA-sp_fac_asu_N.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   PANTHER; PTHR10644:SF3; DNA DAMAGE-BINDING PROTEIN 1; 1.
DR   PANTHER; PTHR10644; DNA REPAIR/RNA PROCESSING CPSF FAMILY; 1.
DR   Pfam; PF03178; CPSF_A; 1.
DR   Pfam; PF10433; MMS1_N; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000031512}.
FT   DOMAIN          90..669
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF10433"
FT   DOMAIN          1096..1346
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF03178"
FT   REGION          196..221
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        196..216
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1387 AA;  154743 MW;  4410529C4DE9A4C4 CRC64;
     MYSYCVTAAP SGATINAIKC KLVKNSETEY LVCLKRHSID VYSIKSTVSS SETTNVSDSR
     PVLTATLKAN STFVAFLEYR PPNSNQSCIL VLTSNYILKL LAYDDENAKF VSKTVASLQE
     PACNKIQSSV LLKVDRGYNV IIFYGLRRII KCIVLNKADY FDFSDVITLR TNDSILLDIE
     FIDTDFKPQP QSLSDEYMDH AKSSSQQQQV GTPDSKRRGN TPKKMFLECK IIVLGQNRNT
     DSVRPARWLY GMQLFFEIEE TVNYRIFNSY GHVPMFGEPM YLENPYNKFL PLHLNETAKS
     TDSVLLLGAG SVGFFAFNDP KSIKDFVSDF SMSEITGYCQ IEHSKFVLSD DNGNIHLMEL
     VLSSKPANTG LKRRIRPINS NNNCDMHAHR GRTIATISDV IITRLYNCDI PSSIINIGNN
     TIFSTSKVGN TCTFRIDFGN KPSICSDSFK IEEFNVYKTW NQTNLGPIAD FTYGEENSHG
     NKSVLACCGM GSAGKFCSIT LGVGIDTICS NTILGISNLF SVSSGGSKTD SNESILCCSF
     YRNTQFYSVN FVSMNNTQGN INSSLLDINE PNVGYVNKMV MDGSTFREDE RTILLSNIDK
     DKIVQITTSS IIILSSNPKL NRIAYKTVEE IMTEIDEGSE ERNRIVHACL CGSYIFIILS
     NHWAAILDGK KLEMVNVEPL SINISSVAYI SHVKNSAEFL ALSTWEKSSI LILSFPNLDI
     VRRIKIECTF GIYIKSMKFG ATNNNLFFFV SLSDGQLMVY KVQMSRNITN AVSKGKSDVF
     KNDVEIDFIL DSTMHLSNTC TKLEFLNLSN NYIHEQTCNL DCNNIIAIGK QSTAIFSKRD
     KVEFAKVNIS HVSCLCTIPT QRTSSEFNSV LIAYYSYPSL VIGKLDPIEQ FHVQNIISGR
     TFDKVCYHVP SKVAVVGCPP ELSATTSDSV PGLNDIDDNN PPFMCLDGSE SEKVNSLKLP
     ALALFINVSS KEVIYNLNLP REHLVSSLHT MSFDGTNEVI LIGTSKVDES HDAPTEGFLY
     IVDISSHSED RLVMTIQRTT KPFAGGVVEI TSCGQNPVIA VNNVVLALSL CSNIGVRNEK
     DRYDLEYLYA CDDIIDSRQC LVVEAKYTSN TYVVSLDSCE NNIIVGDLMT SAKLLRFKDN
     CFYELCRDFN SIWCTAVASI DKNTSIVSDD SGNFSIFSKN ETPTNDAQSA KFQVMGLFHH
     GEIINKIVEH VSKECKYERK KSLIKLGGVA SSCKRNFCCL STADTCPMDP TNGSKSTNIH
     KDAAPTRYRF DKTYLCATSS GSILKMSTFK DMDAFLRLAL LEEAIIGIQS DAGNIPNSKW
     RNFQNSHTNI QTRGFIDGDT VESFLHLPMD LKRRVLEKLQ ESSKDIQGDF DSIETLTLEI
     EQIQRVR
//