ID   L0B0L5_THEEQ            Unreviewed;      1175 AA.
AC   L0B0L5;
DT   06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT   06-MAR-2013, sequence version 1.
DT   24-JAN-2024, entry version 38.
DE   SubName: Full=CPSF A subunit region domain-containing protein {ECO:0000313|EMBL:AFZ81043.1};
GN   ORFNames=BEWA_004510 {ECO:0000313|EMBL:AFZ81043.1};
OS   Theileria equi strain WA.
OC   Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Piroplasmida;
OC   Theileriidae; Theileria.
OX   NCBI_TaxID=1537102 {ECO:0000313|EMBL:AFZ81043.1, ECO:0000313|Proteomes:UP000031512};
RN   [1] {ECO:0000313|EMBL:AFZ81043.1, ECO:0000313|Proteomes:UP000031512}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=WA {ECO:0000313|EMBL:AFZ81043.1,
RC   ECO:0000313|Proteomes:UP000031512};
RX   PubMed=23137308; DOI=10.1186/1471-2164-13-603;
RA   Kappmeyer L.S., Thiagarajan M., Herndon D.R., Ramsay J.D., Caler E.,
RA   Djikeng A., Gillespie J.J., Lau A.O., Roalson E.H., Silva J.C., Silva M.G.,
RA   Suarez C.E., Ueti M.W., Nene V.M., Mealey R.H., Knowles D.P., Brayton K.A.;
RT   "Comparative genomic analysis and phylogenetic position of Theileria
RT   equi.";
RL   BMC Genomics 13:603-603(2012).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the RSE1 family.
CC       {ECO:0000256|ARBA:ARBA00038266}.
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DR   EMBL; CP001670; AFZ81043.1; -; Genomic_DNA.
DR   RefSeq; XP_004830709.1; XM_004830652.1.
DR   AlphaFoldDB; L0B0L5; -.
DR   STRING; 1537102.L0B0L5; -.
DR   EnsemblProtists; AFZ81043; AFZ81043; BEWA_004510.
DR   GeneID; 15805313; -.
DR   KEGG; beq:BEWA_004510; -.
DR   VEuPathDB; PiroplasmaDB:BEWA_004510; -.
DR   eggNOG; KOG1898; Eukaryota.
DR   OrthoDB; 101343at2759; -.
DR   Proteomes; UP000031512; Chromosome 3.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 3.
DR   InterPro; IPR004871; Cleavage/polyA-sp_fac_asu_C.
DR   InterPro; IPR018846; Cleavage/polyA-sp_fac_asu_N.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   PANTHER; PTHR10644; DNA REPAIR/RNA PROCESSING CPSF FAMILY; 1.
DR   PANTHER; PTHR10644:SF1; SPLICING FACTOR 3B SUBUNIT 3; 1.
DR   Pfam; PF03178; CPSF_A; 1.
DR   Pfam; PF10433; MMS1_N; 1.
DR   SUPFAM; SSF50978; WD40 repeat-like; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000031512}.
FT   DOMAIN          76..590
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF10433"
FT   DOMAIN          842..1141
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF03178"
SQ   SEQUENCE   1175 AA;  129494 MW;  1E4587C66641D67F CRC64;
     MPVLYHLTLK RPTGITQAVQ GSFSAPKAQE IVVARSHILE LLSPDSNGKL QSICVCDVFG
     IVRTMSTFCL TGTQRDYLVV GSDSGRLVVL EFCAVSRSFK RIHCETFGKT GIRRIVPGQY
     LAVDPKGRAV IIGAVERQKF VYILNRDAKA NLTISSPLEA HKSHSICFDL VGLDVGFENP
     VFASIEQSYE AVDALQIDLD EELTDDALRK GVSFWELDLG LNHVVKKVTL PIDLSAHLLI
     PVPGGDGPGG VVVCCENFLV YKNVEHAEVA CAYPRRLEMP QEKSLIIVAY AVHRMKDFFF
     ILIQSEFGDV YKVELTYEEG VVKEIVCRYF DTVPVSVSLC ILRSGYLFVA SEFGNHHLYQ
     FTGLGTDERD PLCTSLHPHG RSAIIAFKPR ALQNLQLVDE LSSLSAITDM KVADIQGLGQ
     HQIFLGCGRG SRSSLRVLRY GIAIEGLASS ELPGRPKSVW TVRSSFESAY DGFIIVGFEG
     NTLVLSVGEA VEEVTDSCFL TSITTLHVAL MGDGSFIQVH DAGIRHVYDQ RVKEWRAPSS
     KRVKVAASND RQVILGLSGG DVIYFEIDDS GNLVEYAKKS LSVEISCLDL QPTPKGRILA
     NFMAIGTLDN SVRVLTLDKS LKVVSTQILS NNSTPESVCI SEFAVGDSSL VYLHVGLNTG
     VMLRSTVDPI SGALSDQESR FLGGRAVKFR RVSLGSSFAI VALSDKPWLI YTHRGILLVS
     PINVGTLESA DSLISPICPD GFVAVSGNTL RIFRCTSLGE TFAESQLPLT YTPRKLVLMP
     SEAPSVGSLN YMLAIVESDH ARYNEDQSLE IKNVHAGIEL PSDYCESLDY TDFKAEPGKW
     GSCLRIVNPL TLETVAKLLF ETDEAAMCAQ VVVLDGIQCL VVGTAIGMNL KGDPDSVSGY
     LRVYAYGANY EIRLLHATPI TGVPRALAGY EGKLICALGS RLRLYALGKR QLLLKAEHRT
     CTDHGFIWIS VCGSRIFAGD IREGFQLLRL RFYAEDAAEF EWIGHSTGPR WLSCCEQLDY
     HTVIGGDKFD SLFIARVPQE EFTKATQFEN HAQFHLGDLP TAISKVSFNN MSQPIVIYST
     ILGSIGAFIP YANKDELDLM QHLEMIMANE HPPLCGREHA FFRSYYYPVQ NIVDGDLCEQ
     VKTLPEAVQR KIATQLDTNV HTLLRKVDDV RNRIL
//