ID L0HIM5_METFS Unreviewed; 287 AA.
AC L0HIM5;
DT 06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT 06-MAR-2013, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE RecName: Full=Transcriptional regulator {ECO:0008006|Google:ProtNLM};
DE Flags: Precursor;
GN OrderedLocusNames=Metfor_1916 {ECO:0000313|EMBL:AGB02934.1};
OS Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).
OC Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC Methanomicrobiales; Methanoregulaceae; Methanoregula.
OX NCBI_TaxID=593750 {ECO:0000313|EMBL:AGB02934.1, ECO:0000313|Proteomes:UP000010824};
RN [1] {ECO:0000313|Proteomes:UP000010824}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 22288 / NBRC 105244 / SMSP
RC {ECO:0000313|Proteomes:UP000010824};
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Ovchinnikova G., Teshima H., Detter J.C., Han C., Tapia R.,
RA Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Imachi H.,
RA Tamaki H., Sekiguchi Y., Kamagata Y., Cadillo-Quiroz H., Zinder S.,
RA Liu W.-T., Woyke T.;
RT "Complete sequence of Methanoregula formicicum SMSP.";
RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AGB02934.1, ECO:0000313|Proteomes:UP000010824}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 22288 / NBRC 105244 / SMSP
RC {ECO:0000313|Proteomes:UP000010824};
RX PubMed=25189582;
RA Yamamoto K., Tamaki H., Cadillo-Quiroz H., Imachi H., Kyrpides N.,
RA Woyke T., Goodwin L., Zinder S.H., Kamagata Y., Liu W.T.;
RT "Complete Genome Sequence of Methanoregula formicica SMSPT, a Mesophilic
RT Hydrogenotrophic Methanogen Isolated from a Methanogenic Upflow Anaerobic
RT Sludge Blanket Reactor.";
RL Genome Announc. 2:e00870-14(2014).
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DR EMBL; CP003167; AGB02934.1; -; Genomic_DNA.
DR RefSeq; WP_015285897.1; NC_019943.1.
DR AlphaFoldDB; L0HIM5; -.
DR STRING; 593750.Metfor_1916; -.
DR GeneID; 14308305; -.
DR KEGG; mfo:Metfor_1916; -.
DR eggNOG; arCOG02611; Archaea.
DR HOGENOM; CLU_084118_0_1_2; -.
DR InParanoid; L0HIM5; -.
DR OrthoDB; 28610at2157; -.
DR Proteomes; UP000010824; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd00090; HTH_ARSR; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR InterPro; IPR011991; ArsR-like_HTH.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR36216:SF1; HTH ARSR-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR36216; TRANSCRIPTIONAL REGULATOR, TRMB; 1.
DR Pfam; PF13412; HTH_24; 2.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 2.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000010824};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 74..95
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
SQ SEQUENCE 287 AA; 31523 MW; C3D19F959E46E75E CRC64;
MGVKNLAGNT RTLAFLVLAF VLVLPVMAIE TGGYEVRPAY SLSPDDTSRD FIPASSTSPF
AGEPEPQPIA YSDLPLAVLL VLAIAGTCTL QAYLLRLFVP GNLPLISGLV KLHRKELLVN
ASRNLIYRTI RENPGINPSE IERMTNLTNK NVAYHLNKLL DYHLIVDVKS ANGKGYFRNS
STDSSSERML RLHSKNPTER MIIAILSSNP GISRKEIGSI AGISGPSVSW HISRLEKDNI
VEKIREGTIV HHYIKEGFKG LSETLTGIQQ TGSVYEESLR SSLNPVE
//
