GenomeNet

Database: UniProt
Entry: L0IT48_9MYCO
LinkDB: L0IT48_9MYCO
Original site: L0IT48_9MYCO 
ID   L0IT48_9MYCO            Unreviewed;       200 AA.
AC   L0IT48;
DT   06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT   06-MAR-2013, sequence version 1.
DT   24-JAN-2024, entry version 50.
DE   SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:AGB21934.1};
GN   ORFNames=Mycsm_01527 {ECO:0000313|EMBL:AGB21934.1};
OS   Mycobacterium sp. JS623.
OC   Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae;
OC   Mycobacterium.
OX   NCBI_TaxID=212767 {ECO:0000313|EMBL:AGB21934.1, ECO:0000313|Proteomes:UP000010844};
RN   [1] {ECO:0000313|Proteomes:UP000010844}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JS623 {ECO:0000313|Proteomes:UP000010844};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA   Peters L., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L.,
RA   Kyrpides N., Ivanova N., Pagani I., Mattes T., Holmes A., Rutledge P.,
RA   Paulsen I., Coleman N., Woyke T.;
RT   "Complete sequence of chromosome of Mycobacterium smegmatis JS623.";
RL   Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP003078; AGB21934.1; -; Genomic_DNA.
DR   RefSeq; WP_015305516.1; NC_019966.1.
DR   AlphaFoldDB; L0IT48; -.
DR   STRING; 212767.Mycsm_01527; -.
DR   KEGG; msa:Mycsm_01527; -.
DR   PATRIC; fig|710686.3.peg.1542; -.
DR   HOGENOM; CLU_069356_25_6_11; -.
DR   OrthoDB; 9796019at2; -.
DR   Proteomes; UP000010844; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProt.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   Gene3D; 1.10.357.10; Tetracycline Repressor, domain 2; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR001647; HTH_TetR.
DR   InterPro; IPR036271; Tet_transcr_reg_TetR-rel_C_sf.
DR   InterPro; IPR011075; TetR_C.
DR   PANTHER; PTHR30055; HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTR; 1.
DR   PANTHER; PTHR30055:SF230; TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY TETR-FAMILY)-RELATED; 1.
DR   Pfam; PF16859; TetR_C_11; 1.
DR   Pfam; PF00440; TetR_N; 1.
DR   PRINTS; PR00455; HTHTETR.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   SUPFAM; SSF48498; Tetracyclin repressor-like, C-terminal domain; 1.
DR   PROSITE; PS50977; HTH_TETR_2; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00335}.
FT   DOMAIN          20..80
FT                   /note="HTH tetR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50977"
FT   DNA_BIND        43..62
FT                   /note="H-T-H motif"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00335"
SQ   SEQUENCE   200 AA;  21139 MW;  CA4AEC4681741163 CRC64;
     MKADASAVDK SPTAGRPRDP RIDAAILRAA ADLLVEIGYS NLTMAAVAER AGTTKTALYR
     RWSSKAELVH EAAFPAAPTA IETPPGDIAA DIHAMIAAAR DVFTSPLVRA ALPGLIADMA
     GDADLNARVM SRFTDVFVAV RTRLADAVRR GEVHVDVDPD RLVEVIGGAT MLRVLLQPDE
     PLGEDWVAQT TAIVVHGVVA
//
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