ID L0J4R1_9MYCO Unreviewed; 238 AA.
AC L0J4R1;
DT 06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT 06-MAR-2013, sequence version 1.
DT 24-JAN-2024, entry version 48.
DE SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:AGB25607.1};
GN ORFNames=Mycsm_05416 {ECO:0000313|EMBL:AGB25607.1};
OS Mycobacterium sp. JS623.
OC Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae;
OC Mycobacterium.
OX NCBI_TaxID=212767 {ECO:0000313|EMBL:AGB25607.1, ECO:0000313|Proteomes:UP000010844};
RN [1] {ECO:0000313|Proteomes:UP000010844}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JS623 {ECO:0000313|Proteomes:UP000010844};
RG US DOE Joint Genome Institute;
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L.,
RA Kyrpides N., Ivanova N., Pagani I., Mattes T., Holmes A., Rutledge P.,
RA Paulsen I., Coleman N., Woyke T.;
RT "Complete sequence of chromosome of Mycobacterium smegmatis JS623.";
RL Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP003078; AGB25607.1; -; Genomic_DNA.
DR RefSeq; WP_015309183.1; NC_019966.1.
DR AlphaFoldDB; L0J4R1; -.
DR STRING; 212767.Mycsm_05416; -.
DR KEGG; msa:Mycsm_05416; -.
DR PATRIC; fig|710686.3.peg.5451; -.
DR HOGENOM; CLU_062618_5_2_11; -.
DR OrthoDB; 5242615at2; -.
DR Proteomes; UP000010844; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR PANTHER; PTHR30136:SF35; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF09339; HTH_IclR; 1.
DR Pfam; PF01614; IclR; 1.
DR SMART; SM00346; HTH_ICLR; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51077; HTH_ICLR; 1.
DR PROSITE; PS51078; ICLR_ED; 1.
PE 4: Predicted;
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 13..75
FT /note="HTH iclR-type"
FT /evidence="ECO:0000259|PROSITE:PS51077"
FT DOMAIN 64..238
FT /note="IclR-ED"
FT /evidence="ECO:0000259|PROSITE:PS51078"
SQ SEQUENCE 238 AA; 25071 MW; 7A6F4136248F954C CRC64;
MSPADGTLSG RQPKAVQSAL RVLEEVARAG VGVTAKEIAE NLSMPSATAY RLLNLLVAEG
YIVRLPDLSG FSLGHRMGVL IDAAVAPTVC TAAREVLSEV RLSVRFGVHL FYFTNTAVRA
ADLDSEFPPP VGEAVLNRNL HRSAVGRLLL AEKQHLDGLV PVSEELLATL DAVRQQGFAT
QTGELREDCA CVAVPVRAPS GALVAALGMS GRADQDLLLT KQVPALTECA ALLSPLLA
//
