ID L0JG35_PREDD Unreviewed; 416 AA.
AC L0JG35;
DT 06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT 06-MAR-2013, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE SubName: Full=Site-specific recombinase XerD {ECO:0000313|EMBL:AGB29798.1};
GN OrderedLocusNames=Prede_2562 {ECO:0000313|EMBL:AGB29798.1};
OS Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC 12043
OS / ES 2772) (Mitsuokella dentalis).
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae;
OC Prevotella.
OX NCBI_TaxID=908937 {ECO:0000313|EMBL:AGB29798.1, ECO:0000313|Proteomes:UP000010862};
RN [1] {ECO:0000313|Proteomes:UP000010862}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 49559 / DSM 3688 / JCM 13448 / NCTC 12043 / ES 2772
RC {ECO:0000313|Proteomes:UP000010862};
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Peters L., Mikhailova N., Chertkov O.,
RA Kyrpides N., Mavromatis K., Ivanova N., Brettin T., Detter J.C., Han C.,
RA Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P.,
RA Woyke T., Wu D., Gronow S., Wellnitz S., Brambilla E., Klenk H.-P.,
RA Eisen J.A.;
RT "Complete sequence of chromosome 2 of Prevotella dentalis DSM 3688.";
RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP003369; AGB29798.1; -; Genomic_DNA.
DR AlphaFoldDB; L0JG35; -.
DR KEGG; pdt:Prede_2562; -.
DR PATRIC; fig|908937.9.peg.2713; -.
DR HOGENOM; CLU_033139_2_0_10; -.
DR Proteomes; UP000010862; Chromosome 2.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR CDD; cd01185; INTN1_C_like; 1.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR InterPro; IPR035386; Arm-DNA-bind_5.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR InterPro; IPR025269; SAM-like_dom.
DR PANTHER; PTHR30349:SF84; INTEGRASE_RECOMBINASE YOEC-RELATED; 1.
DR PANTHER; PTHR30349; PHAGE INTEGRASE-RELATED; 1.
DR Pfam; PF17293; Arm-DNA-bind_5; 1.
DR Pfam; PF13102; Phage_int_SAM_5; 1.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 4: Predicted;
KW DNA integration {ECO:0000256|ARBA:ARBA00022908};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000010862}.
FT DOMAIN 228..403
FT /note="Tyr recombinase"
FT /evidence="ECO:0000259|PROSITE:PS51898"
SQ SEQUENCE 416 AA; 47974 MW; 3B087A4AF6E0E04F CRC64;
MPIELKYMKI EKFKVLLYLK KSRLDKSGKA PIMGRITVNR SMVQFGCKIS CTPDLWNPRE
SRLKGKSHEA VETNAKLDKL MLSIHTAFDT LVGRNAEFDA EAVKNLFQGS LETQMTLLGM
TDIVCEELRK RIGIDRAKGT YPAYIYTRRT LAEFIEKEFR TKDVAFGQMT EQFIHDYQSF
ILDEKGLAID TCRHYLAIVK KVCRKAYKEG HADRCFFAHF SLPQPKEKTP KALSRESFEK
IRDLVIPEHR ASHILARDLF LFACYTGTAY ADAVSVTRDN LFTDDDGGLW LKYRRKKNEL
RACVKLLPEA LALIEKYRDD DRQTLFPMLH YPNMRRLMKC LAVLADIKED LTYHAGRHSF
ASLITLEAGV PIETICKMLG HSNLQTTQVY AKVTPKKLFE DMDKYIEATK DLKLIL
//
