ID L0JH11_PREDD Unreviewed; 409 AA.
AC L0JH11;
DT 06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT 06-MAR-2013, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE SubName: Full=Site-specific recombinase XerD {ECO:0000313|EMBL:AGB29626.1};
GN OrderedLocusNames=Prede_2363 {ECO:0000313|EMBL:AGB29626.1};
OS Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC 12043
OS / ES 2772) (Mitsuokella dentalis).
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae;
OC Prevotella.
OX NCBI_TaxID=908937 {ECO:0000313|EMBL:AGB29626.1, ECO:0000313|Proteomes:UP000010862};
RN [1] {ECO:0000313|Proteomes:UP000010862}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 49559 / DSM 3688 / JCM 13448 / NCTC 12043 / ES 2772
RC {ECO:0000313|Proteomes:UP000010862};
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Peters L., Mikhailova N., Chertkov O.,
RA Kyrpides N., Mavromatis K., Ivanova N., Brettin T., Detter J.C., Han C.,
RA Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P.,
RA Woyke T., Wu D., Gronow S., Wellnitz S., Brambilla E., Klenk H.-P.,
RA Eisen J.A.;
RT "Complete sequence of chromosome 2 of Prevotella dentalis DSM 3688.";
RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP003369; AGB29626.1; -; Genomic_DNA.
DR RefSeq; WP_015310515.1; NC_019968.1.
DR AlphaFoldDB; L0JH11; -.
DR KEGG; pdt:Prede_2363; -.
DR PATRIC; fig|908937.9.peg.2497; -.
DR HOGENOM; CLU_033139_2_0_10; -.
DR OrthoDB; 1493636at2; -.
DR Proteomes; UP000010862; Chromosome 2.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR CDD; cd01185; INTN1_C_like; 1.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR InterPro; IPR035386; Arm-DNA-bind_5.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR InterPro; IPR025269; SAM-like_dom.
DR PANTHER; PTHR30349:SF84; INTEGRASE_RECOMBINASE YOEC-RELATED; 1.
DR PANTHER; PTHR30349; PHAGE INTEGRASE-RELATED; 1.
DR Pfam; PF17293; Arm-DNA-bind_5; 1.
DR Pfam; PF13102; Phage_int_SAM_5; 1.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 4: Predicted;
KW DNA integration {ECO:0000256|ARBA:ARBA00022908};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000010862}.
FT DOMAIN 221..396
FT /note="Tyr recombinase"
FT /evidence="ECO:0000259|PROSITE:PS51898"
SQ SEQUENCE 409 AA; 47096 MW; C91DE7671D47668C CRC64;
MKIEKFKVLL YLKKSRLDKS GKAPIMGRIT VNRSMVQFSC KISCTPDLWN PRESRLKGKS
HEAVETNAKL DKLMLSIHTA FDTLVGRNAD FDAEAVKNLF QGSLETQMPL LGMTDIVCEE
LRKRIGIDRA KGTYPAYIYT RRTLAEFIEK EFRTKDVAFG QMTEQFIHDY QSFILDEKGL
AIDTCRHYLA IVKKVCRKAY KEGHADRCFF AHFSLPQPKE KTPKALSRES FEKIRDLVIP
EHRASHILAR DLFLFACYTG TAYADAVSVT RDNLFTDDNG GLWLKYRRKK NELRACVKLL
PEALALIEKY RDDDRQTLFP MLHYPNMRRL MKCLAVLADI KEDLTYHAGR HSFASLITLE
AGVPIETICK MLGHSNLQTT QVYAKVTPKK LFEDMDKYIE ATKDLKLVL
//
