ID L0K770_HALHC Unreviewed; 615 AA.
AC L0K770;
DT 06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT 06-MAR-2013, sequence version 1.
DT 27-MAR-2024, entry version 63.
DE SubName: Full=PAS domain S-box {ECO:0000313|EMBL:AGB41132.1};
GN OrderedLocusNames=Halha_1184 {ECO:0000313|EMBL:AGB41132.1};
OS Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1).
OC Bacteria; Bacillota; Clostridia; Halanaerobiales; Halobacteroidaceae;
OC Halobacteroides.
OX NCBI_TaxID=748449 {ECO:0000313|EMBL:AGB41132.1, ECO:0000313|Proteomes:UP000010880};
RN [1] {ECO:0000313|Proteomes:UP000010880}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 35273 / DSM 5150 / MD-1
RC {ECO:0000313|Proteomes:UP000010880};
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Peters L., Mikhailova N., Gu W.,
RA Kyrpides N., Mavromatis K., Ivanova N., Brettin T., Detter J.C., Han C.,
RA Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P.,
RA Woyke T., Wu D., Tindall B., Pomrenke H., Brambilla E., Klenk H.-P.,
RA Eisen J.A.;
RT "The complete genome of Halobacteroides halobius DSM 5150.";
RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP003359; AGB41132.1; -; Genomic_DNA.
DR RefSeq; WP_015326855.1; NC_019978.1.
DR AlphaFoldDB; L0K770; -.
DR STRING; 748449.Halha_1184; -.
DR KEGG; hhl:Halha_1184; -.
DR PATRIC; fig|748449.3.peg.1143; -.
DR eggNOG; COG3829; Bacteria.
DR HOGENOM; CLU_000445_8_5_9; -.
DR Proteomes; UP000010880; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0000156; F:phosphorelay response regulator activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.40.50.2300; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR Gene3D; 3.40.50.10660; PrpR receptor domain-like; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR010524; Sig_transdc_resp-reg_PrpR_N.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF06506; PrpR_N; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF159800; PrpR receptor domain-like; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000010880};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 179..224
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 308..538
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 615 AA; 69076 MW; 4EEA7DF546658E99 CRC64;
MKRLSDQVIK ENNLFVTTMV GDLKEGVKVA NRAINKGAEV IISRGGTASL IKQNISAPVV
EINVTGYDLL RVLYKYRQHQ EQIGVIGYEN VIYGVKAISE LIGINIDYYK IEEESQVESR
VEEAVNNNVK TIIGDTITVR TAKGYNLNYE LITSGKEAIL NSIYRAQKVY EATVVEREKK
EKLETILDSA HEGIIAIDKE GVITAFNPKA ENLFNKQAAE VIDNKVDQII PSTKLLEVLK
EKQPKVGEIQ NVGQTKIATN RVPIKVGGVV KGAVATFQDV TKVQELEQKI RQELNKKGLT
AQYKLEDIIG VSKEIQDKKR LAYRYGQVDS TVLINGESGT GKELFAQGIH NCSQRKVGPF
VAINCAALPT NLLESELFGY EEGSFTGAQK GGKKGLFELA HQGTIFLDEI AEMDQSLQAR
LLRVIQEKEV MKLGGREIIP IDVRIIAATN KNLKEEIEAG RFRKDLYYRL NVLDLTIPPL
RKRREDIQAI LDFLIVKKSG ELNKQIIRVD KEVIKTLVEY DWPGNVRELE NIIEKMIVTS
KGKVIEKEEV DFILAKLVKK EDDFKTFQCT INATGTLEEM EKEIIKQVVT EVGSKTQAAN
KLGITRSTIW RKLKE
//
