ID L0L1E5_METHD Unreviewed; 1881 AA.
AC L0L1E5;
DT 06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT 06-MAR-2013, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE SubName: Full=PDK repeat-containing protein {ECO:0000313|EMBL:AGB50755.1};
DE Flags: Precursor;
GN OrderedLocusNames=Metho_2623 {ECO:0000313|EMBL:AGB50755.1};
OS Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1).
OG Plasmid pMETHO01 {ECO:0000313|EMBL:AGB50755.1,
OG ECO:0000313|Proteomes:UP000010866}.
OC Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.
OX NCBI_TaxID=867904 {ECO:0000313|EMBL:AGB50755.1, ECO:0000313|Proteomes:UP000010866};
RN [1] {ECO:0000313|Proteomes:UP000010866}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 15978 / NBRC 107637 / DMS1
RC {ECO:0000313|Proteomes:UP000010866};
RC PLASMID=Plasmid pMETHO01 {ECO:0000313|Proteomes:UP000010866};
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Peters L., Mikhailova N., Held B.,
RA Kyrpides N., Mavromatis K., Ivanova N., Brettin T., Detter J.C., Han C.,
RA Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P.,
RA Woyke T., Wu D., Spring S., Schroeder M., Brambilla E., Klenk H.-P.,
RA Eisen J.A.;
RT "Complete sequence of plasmid of Methanomethylovorans hollandica DSM
RT 15978.";
RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP003363; AGB50755.1; -; Genomic_DNA.
DR KEGG; mhz:Metho_2623; -.
DR HOGENOM; CLU_237670_0_0_2; -.
DR Proteomes; UP000010866; Plasmid pMETHO01.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR CDD; cd00146; PKD; 5.
DR Gene3D; 3.40.50.1820; alpha/beta hydrolase; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 6.
DR Gene3D; 2.120.10.30; TolB, C-terminal domain; 2.
DR InterPro; IPR011042; 6-blade_b-propeller_TolB-like.
DR InterPro; IPR029058; AB_hydrolase.
DR InterPro; IPR010671; Disaggr-rel_rpt.
DR InterPro; IPR022742; Hydrolase_4.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR029865; KIAA0319-like.
DR InterPro; IPR001258; NHL_repeat.
DR InterPro; IPR022409; PKD/Chitinase_dom.
DR InterPro; IPR000601; PKD_dom.
DR InterPro; IPR035986; PKD_dom_sf.
DR NCBIfam; NF033679; DNRLRE_dom; 3.
DR PANTHER; PTHR46182; FI19480P1; 1.
DR PANTHER; PTHR46182:SF2; FI19480P1; 1.
DR Pfam; PF06848; Disaggr_repeat; 3.
DR Pfam; PF12146; Hydrolase_4; 1.
DR Pfam; PF01436; NHL; 1.
DR Pfam; PF18911; PKD_4; 6.
DR SMART; SM00089; PKD; 6.
DR SUPFAM; SSF53474; alpha/beta-Hydrolases; 1.
DR SUPFAM; SSF63829; Calcium-dependent phosphotriesterase; 1.
DR SUPFAM; SSF49299; PKD domain; 6.
DR PROSITE; PS51125; NHL; 3.
DR PROSITE; PS50093; PKD; 6.
PE 4: Predicted;
KW Plasmid {ECO:0000313|EMBL:AGB50755.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000010866};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 334..410
FT /note="PKD"
FT /evidence="ECO:0000259|PROSITE:PS50093"
FT DOMAIN 444..499
FT /note="PKD"
FT /evidence="ECO:0000259|PROSITE:PS50093"
FT DOMAIN 959..1018
FT /note="PKD"
FT /evidence="ECO:0000259|PROSITE:PS50093"
FT DOMAIN 1218..1309
FT /note="PKD"
FT /evidence="ECO:0000259|PROSITE:PS50093"
FT DOMAIN 1310..1401
FT /note="PKD"
FT /evidence="ECO:0000259|PROSITE:PS50093"
FT DOMAIN 1600..1691
FT /note="PKD"
FT /evidence="ECO:0000259|PROSITE:PS50093"
SQ SEQUENCE 1881 AA; 205415 MW; 7D28733BFEE96A73 CRC64;
MESKYVNKIR TTSILLSILF FVLMSSPIVH AETYSLVKQW GSTGNSTGQF NNPSAVTVDS
YGNVYVADAN NYRIQKFDNN GAFINSFETW YKSQFHIHPR GVAVDSSGYI YTSGCGGNGG
IAGAAYGIRY GTVYHKYDNN GNLVSEVYPN GAMGFYYSVY LPWETAVDKF GNVYVSDVTN
GYVDKFNNGI CMSAFQNRSI SGSDSKFSID SLGNYYIIYG GFINKFDSNG NFITKIGSSG
SGDGQIRDPV AVAVDDSGNI YVVDCQQKDY TLKEYYRIEV FDTNYKFITQ WQLSSNFSNI
YNSDIAVDST GNVFVVESYN NRIYKYAPTN SVNPAANFTS NITEGYTPLS VKFTDTSTGS
PTSWLWDFGD GNTSTEQNPT YTYYKSGNYT VTLTASNSEG TDSTSQTISV NDIDFKVNPQ
KIRISDKVEF NASQYISSTG GGITWDFGDG KTDLSNNPIV YHNYSEPGSY TAKITITDSK
GNVATKSQFV NVTIPVVLVH GFMSSSETWV DMSSALQKNG FEVWNFDYGI YSTQNPQDIA
PKLSDFIEGK RNDLTYNGQK YNGKIDIVCH SMGSIVSRLY MEHYQGGIHG KDVRQWIGIA
PAHGGSAGAD IYIPVGQVKS QILLNFMQAT PPEYYAFYQQ IGLAVNELKT DSNSVKSLAS
GSLSPTTKYR VLVGWNPTHS SQFGGNLLSA TLAKNTSRPD PYYWTDSGDM IVATAQSYDQ
RIKNFEAFPI NGNLGDSPAE EFDHIHIIKS PTVIQYVIDC LKDINKPSSN KLPPDNEVSF
LTVVNRDIKG YIGTKAQQVT GYLGTKVQQI KFFVSGFFSM GSDSISNLRV ESNSITIDQE
TSSSQEKVLS ILLEWDEGDI AVNLMSPSGI EYSAESHPYN VWYLKEGKLL YYIITDPESG
NWTVNLIPEE YPGHDMHYNL TYWVEDSNSG VLNGFPVANF STNITTGYVP LTVQFTDLSE
NATSWKWDFG DGAASTEQDP LHIYTKEGNY TIVLNSSNSI GYSTKQTTIA VKSNSASTST
ASYAPTYDNR LRSASPTSVL STTTYLDIGR SSATVRDVML FDLSSYKTTD TISKATLSLY
WYYPAGATRT SDTVVEVYRP VEWDPKYVTW NSRASGVSWT TAGGSWYDKN AVSQGTTPYA
SITFPASTVP DNKYYDFDVT QLVQEYVSGK YKNTGFFLKA KTESGNYIAF YSAEASNTAV
RPKLTVTSTS GSTAVDNLPV ANAGADKTAM AGSTVIFNAS ASTDDKGIAS YSWDFDLSNG
ITAEATTMTA SHIYPVAGTY TATLTVIDTS GQVSTDTVQV TVSEMSVDNP PIANAGIDKT
VTVGSSVTFD GSASTDDKGI ASYSWDFDLS NGITTEATTM AASHIYASPG TYTVTLTVTD
TAGHVATDTL QVVVSSATST TTASYSPTYD NRLRSASPTS VLSTTTYLDI GRSSATVRDV
MLFDLSSYKT TDTISKATLS LYWYYPAGST RTSDTIVEVY RPVEWDPKYV TWNSRTSGTL
WTTVGGNWYD KNAVSQGTTP YASATFAAGT IPDNKYYDFD VTQLVQEYVS GKYKNTGFFL
KAKTESGNYI AFYSAEASNT AVRPKLTITS ASGSTTVDNL PVANAGADKT ATVGTSVTFD
ASASTDDKGI ASYSWDFDLS NGITAEAATM IASKTYTATG TYTVTLTVTD TVGQKSTDTV
QVVVSSASSP VSTVSYTPTY DNRLRSASPT SVLSTTTYLD IGRSSATVRD VMLFDLSSYK
TTDTISKATL SLYWYYPVGT TRTSDTVVEV YRPVEWDPKY VTWNSRMSGV SWTTAGGSWY
DKNAVSQGTT PYASVTFTGT KLPDNKYYDF DVTQLVQEYV SGKYKNTGFF LKARTESGNY
IAFYSLESSN AAVRPKLTIT S
//
