GenomeNet

Database: UniProt
Entry: L0W8C6_9GAMM
LinkDB: L0W8C6_9GAMM
Original site: L0W8C6_9GAMM 
ID   L0W8C6_9GAMM            Unreviewed;       560 AA.
AC   L0W8C6;
DT   06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT   06-MAR-2013, sequence version 1.
DT   24-JAN-2024, entry version 39.
DE   SubName: Full=Choline/carnitine/betaine transporter {ECO:0000313|EMBL:EKF73224.1};
GN   ORFNames=A11A3_14777 {ECO:0000313|EMBL:EKF73224.1};
OS   Alcanivorax hongdengensis A-11-3.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales;
OC   Alcanivoracaceae; Alcanivorax.
OX   NCBI_TaxID=1177179 {ECO:0000313|EMBL:EKF73224.1, ECO:0000313|Proteomes:UP000010164};
RN   [1] {ECO:0000313|EMBL:EKF73224.1, ECO:0000313|Proteomes:UP000010164}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=A-11-3 {ECO:0000313|EMBL:EKF73224.1,
RC   ECO:0000313|Proteomes:UP000010164};
RX   PubMed=23209226; DOI=10.1128/JB.01849-12;
RA   Lai Q., Shao Z.;
RT   "Genome Sequence of the Alkane-Degrading Bacterium Alcanivorax
RT   hongdengensis Type Strain A-11-3.";
RL   J. Bacteriol. 194:6972-6972(2012).
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC       pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC   -!- SIMILARITY: Belongs to the BCCT transporter (TC 2.A.15) family.
CC       {ECO:0000256|ARBA:ARBA00005658}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EKF73224.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AMRJ01000031; EKF73224.1; -; Genomic_DNA.
DR   AlphaFoldDB; L0W8C6; -.
DR   STRING; 1177179.A11A3_14777; -.
DR   PATRIC; fig|1177179.3.peg.2912; -.
DR   eggNOG; COG1292; Bacteria.
DR   OrthoDB; 9775735at2; -.
DR   Proteomes; UP000010164; Unassembled WGS sequence.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR   GO; GO:0022857; F:transmembrane transporter activity; IEA:InterPro.
DR   GO; GO:0071705; P:nitrogen compound transport; IEA:InterPro.
DR   InterPro; IPR000060; BCCT_transptr.
DR   NCBIfam; TIGR00842; bcct; 1.
DR   PANTHER; PTHR30047:SF7; HIGH-AFFINITY CHOLINE TRANSPORT PROTEIN; 1.
DR   PANTHER; PTHR30047; HIGH-AFFINITY CHOLINE TRANSPORT PROTEIN-RELATED; 1.
DR   Pfam; PF02028; BCCT; 1.
PE   3: Inferred from homology;
KW   Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        12..35
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        55..75
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        96..116
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        151..169
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        197..218
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        238..256
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        268..289
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        323..340
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        352..371
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        405..427
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        448..470
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        476..496
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   REGION          524..560
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        524..540
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        546..560
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   560 AA;  61748 MW;  79F821B2D61F65A9 CRC64;
     MNRLTTFLKR HLGDVGVVFY TSLLIITAFV VTSALQPETV EAIAQKVLDA TAKNVGWMYL
     MATTGFVLFI FFLAFSRFGN LRLGQENELP EFSFTSWLAM IFSGGMGVGL VFWGVAEPIM
     HLNVPPLGLA EPRSVEAAQL GMRYSFFHWG FHQWANFTLV GLAIAYVRFR HNSYGLISET
     FRPLLGERVD RGWGKAIDIL AVVSTLFGVA TTLGLGALQV NSGLSRLGVM DYSTTSQFMI
     LGGLATLFTI SAMTPLDKGI RHLSNANLVI ASGLLLFVLV TGPTAFIFGE LTQTLGEYLG
     NLIEMSLVTA PHSDEKWVEQ WTMFYWAWGL SWAPFVGSFI ARISRGRTIR EFVMGVMVIP
     VALSMLWFST FGGSAIHFEL FEGVGIADAV AEEVPSGLYV LLDQLPWGGV AAVLAVILVS
     MFVVTSADSA TFVLGMFTSK GVLTPTRFVR VLWGCLQLLM ASVLLLSGGL NGLRTLSIVA
     AFPFMLLMVL MAFSLHKDLA TDIRRREEKN AMMHARMEQW LLRESEREAE RQEEEELHPS
     APEQCPGLSR TGQSTPIEET
//
DBGET integrated database retrieval system