ID L1P0K1_9NEIS Unreviewed; 529 AA.
AC L1P0K1;
DT 06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT 06-MAR-2013, sequence version 1.
DT 27-MAR-2024, entry version 54.
DE SubName: Full=Sigma-54 interaction domain protein {ECO:0000313|EMBL:EKY08952.1};
GN ORFNames=HMPREF9120_00577 {ECO:0000313|EMBL:EKY08952.1};
OS Neisseria sp. oral taxon 020 str. F0370.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales; Neisseriaceae;
OC Neisseria.
OX NCBI_TaxID=1127694 {ECO:0000313|EMBL:EKY08952.1, ECO:0000313|Proteomes:UP000010457};
RN [1] {ECO:0000313|EMBL:EKY08952.1, ECO:0000313|Proteomes:UP000010457}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=F0370 {ECO:0000313|EMBL:EKY08952.1,
RC ECO:0000313|Proteomes:UP000010457};
RA Weinstock G., Sodergren E., Lobos E.A., Fulton L., Fulton R., Courtney L.,
RA Fronick C., O'Laughlin M., Godfrey J., Wilson R.M., Miner T., Farmer C.,
RA Delehaunty K., Cordes M., Minx P., Tomlinson C., Chen J., Wollam A.,
RA Pepin K.H., Bhonagiri V., Zhang X., Suruliraj S., Warren W., Mitreva M.,
RA Mardis E.R., Wilson R.K.;
RL Submitted (MAY-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EKY08952.1}.
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DR EMBL; AMER01000043; EKY08952.1; -; Genomic_DNA.
DR RefSeq; WP_009424847.1; NZ_KB291050.1.
DR AlphaFoldDB; L1P0K1; -.
DR STRING; 1127694.HMPREF9120_00577; -.
DR PATRIC; fig|1127694.3.peg.530; -.
DR HOGENOM; CLU_000445_95_2_4; -.
DR OrthoDB; 9761705at2; -.
DR Proteomes; UP000010457; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00065; GAF; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000010457};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 207..426
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
FT COILED 177..204
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 529 AA; 59512 MW; AF1B5CDAA6AF3A72 CRC64;
MTSKHQNERS DWRAQEMLLL QQVMRNLGKD DGAHDTALHI MLQLMSEFFG LNQGRIVLQH
LNDENASIRY AYGMSPEQTA RGVYAPGEGI TGTVLKHAHM IVADNVRSDP LFLGRTVLHD
DIPAEQTMFI ALPVTAHNRT FGVLACLRAR YSPRPLHDDI SLLNILATLV GQLLYIHEHS
EARRQLLKTQ NQKLRQTLQS HSRRYGIVGS SAPLLNAVSE LERVAHSNAN VLLLGENGTG
KEMFARTLHT ASRRVGQPFI KVHCTNTEQE ELGQEIFGEG ETPGLIEQAD GGTLFLDEIA
ALSSDQQIRL LHVLQENAVR RINGGKARNI NVRIITATEH DLAAEVEKGR FDADLYYRLY
VVPIRLPALR ERPGDIPELT AYFMHRINRD TGKNVNLTAE AVEQLQHYSW PGNVYELERF
LTELVKANEG NVADEHQVWQ LLNRLSARPA HNPAPKPAAK AKTAGFAIQG NQARPYLQAD
SHSPEKIEQT LAYCRGNKTQ AAQMLGLSTR QLYYRLEKLK QEREKKKAV
//
