ID L7WD60_NONDD Unreviewed; 592 AA.
AC L7WD60;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE SubName: Full=Rhs element Vgr protein {ECO:0000313|EMBL:AGC77856.1};
GN OrderedLocusNames=DDD_2729 {ECO:0000313|EMBL:AGC77856.1};
OS Nonlabens dokdonensis (strain DSM 17205 / KCTC 12402 / DSW-6) (Donghaeana
OS dokdonensis).
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Nonlabens.
OX NCBI_TaxID=592029 {ECO:0000313|EMBL:AGC77856.1, ECO:0000313|Proteomes:UP000011173};
RN [1] {ECO:0000313|EMBL:AGC77856.1, ECO:0000313|Proteomes:UP000011173}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17205 / KCTC 12402 / DSW-6
RC {ECO:0000313|Proteomes:UP000011173};
RX PubMed=23292138; DOI=10.1093/gbe/evs134;
RA Kwon S.K., Kim B.K., Song J.Y., Kwak M.J., Lee C.H., Yoon J.H., Oh T.K.,
RA Kim J.F.;
RT "Genomic makeup of the marine flavobacterium Nonlabens (Donghaeana)
RT dokdonensis DSW-6 and identification of a novel class of rhodopsins.";
RL Genome Biol. Evol. 5:187-187(2013).
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DR EMBL; CP001397; AGC77856.1; -; Genomic_DNA.
DR RefSeq; WP_015363353.1; NC_020156.1.
DR AlphaFoldDB; L7WD60; -.
DR STRING; 592029.DDD_2729; -.
DR KEGG; ndo:DDD_2729; -.
DR PATRIC; fig|592029.3.peg.2708; -.
DR eggNOG; COG3501; Bacteria.
DR HOGENOM; CLU_455533_0_0_10; -.
DR OrthoDB; 1907165at2; -.
DR Proteomes; UP000011173; Chromosome.
DR Gene3D; 2.40.50.230; Gp5 N-terminal domain; 1.
DR InterPro; IPR006531; Gp5/Vgr_OB.
DR InterPro; IPR006533; T6SS_Vgr_RhsGE.
DR InterPro; IPR037026; Vgr_OB-fold_dom_sf.
DR NCBIfam; TIGR01646; vgr_GE; 1.
DR Pfam; PF04717; Phage_base_V; 1.
DR SUPFAM; SSF69255; gp5 N-terminal domain-like; 1.
DR SUPFAM; SSF69279; Phage tail proteins; 1.
PE 4: Predicted;
FT DOMAIN 370..444
FT /note="Gp5/Type VI secretion system Vgr protein OB-fold"
FT /evidence="ECO:0000259|Pfam:PF04717"
SQ SEQUENCE 592 AA; 64573 MW; 33470E49A5C0CA55 CRC64;
MNTPNIDLTT LAIKSNGSSI PDEFQVSSVV VKKELNRISK AEITLLDGSA ETEQFPASDS
STFVPGTEII IEAGYNDSNK SIFEGIVIGQ RLQIDQEQGS LLIVECYDKA IKMTVGQNSR
SFFNQTDSDI LTTLINNNGL TASVSSTEVK WQQQVQHNAT DWDYLLSRAA ANSLLITNSN
GRVTAQKPDK NTSSVLTAAY GESIFEIDIN LNASDQLSSV KASSWDYKDQ AQLSSTTKNT
YSGPGNLSST QLSNVIDLED YNLQTTAVLD QKELTNWTQA QLLKSNYSKI QGEVKIQGTS
SIEPLNYITL NGIGDRFSGD HLVSNVTHYI ESGVWVTKVS IGLLEKYLYK TIINDTHASG
LIPAMKGLFN GIVKQIDGDP DHQYRILVDV PLMDNTGNGL WARYSNFYAS NNAGALFLPE
IGDEVVLGCL NEDPRSIVIL GSLYSNPKNS PDKNLTLDNN NTVKALVTKS GLRLEFHEND
NEILIATPNE NSIVLSDKEK NISIKDQNDN KFTLSDKGIS MTSPKDISIE ANGKLSLKGD
QGVEMMANGG DVKTSGININ QRADMSYTAN ATQARIEGDA ELTLKGAMVM IN
//