ID   L8J8Z7_9GAMM            Unreviewed;       775 AA.
AC   L8J8Z7;
DT   03-APR-2013, integrated into UniProtKB/TrEMBL.
DT   03-APR-2013, sequence version 1.
DT   24-JAN-2024, entry version 34.
DE   SubName: Full=Transcription accessory protein {ECO:0000313|EMBL:ELR64029.1};
GN   ORFNames=C942_03110 {ECO:0000313|EMBL:ELR64029.1};
OS   Photobacterium marinum.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Photobacterium.
OX   NCBI_TaxID=1056511 {ECO:0000313|EMBL:ELR64029.1, ECO:0000313|Proteomes:UP000011134};
RN   [1] {ECO:0000313|EMBL:ELR64029.1, ECO:0000313|Proteomes:UP000011134}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=AK15 {ECO:0000313|EMBL:ELR64029.1,
RC   ECO:0000313|Proteomes:UP000011134};
RA   Khatri I., Vaidya B., Srinivas T.N.R., Subramanian S., Pinnaka A.;
RT   "Genome Assembly of Photobacterium sp. AK15.";
RL   Submitted (DEC-2012) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:ELR64029.1}.
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DR   EMBL; AMZO01000033; ELR64029.1; -; Genomic_DNA.
DR   RefSeq; WP_007469478.1; NZ_AMZO01000033.1.
DR   AlphaFoldDB; L8J8Z7; -.
DR   PATRIC; fig|1056511.3.peg.4033; -.
DR   OrthoDB; 9804714at2; -.
DR   Proteomes; UP000011134; Unassembled WGS sequence.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR   CDD; cd05685; S1_Tex; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR   Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR   Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR   Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR   InterPro; IPR041692; HHH_9.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR010994; RuvA_2-like.
DR   InterPro; IPR003029; S1_domain.
DR   InterPro; IPR044146; S1_Tex.
DR   InterPro; IPR023323; Tex-like_dom_sf.
DR   InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR   InterPro; IPR018974; Tex-like_N.
DR   InterPro; IPR032639; Tex_YqgF.
DR   InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR   InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR   PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR   PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR   Pfam; PF12836; HHH_3; 1.
DR   Pfam; PF17674; HHH_9; 1.
DR   Pfam; PF00575; S1; 1.
DR   Pfam; PF09371; Tex_N; 1.
DR   Pfam; PF16921; Tex_YqgF; 1.
DR   SMART; SM00316; S1; 1.
DR   SMART; SM00732; YqgFc; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR   SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR   PROSITE; PS50126; S1; 1.
PE   4: Predicted;
FT   DOMAIN          651..720
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   REGION          716..775
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        716..739
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        740..756
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   775 AA;  84914 MW;  757CB5B87B35694E CRC64;
     MSNAINQTIA RELAVREDQV KSAVTLLDDG NTVPFIARYR KEVTGGLDDT QLRNLESRLG
     YLRELDDRRQ VILKSITEQG KLTAELEAEI KGADSKTRLE DLYLPYKPKR RTKGQIAIEA
     GLEPLAETLW NQPENEPEAT AAQYLDAEKG VADTKAALDG ARAILMERFA EDAALLDKIR
     RHLQGNAELT SRVVEGKEQE GAKFKDYFEY SEQLKQIPSH RALALFRGRN EGFLQLSLNA
     DPQQEEGVRG SYCEVMIADH YGVKPGSQPA DSWRKQVISW AWRIKILMHM ETELMSALRE
     KAEDGAMQVF ADNLKDLLMA APAGPRVTLA LDPGLRTGCK VAVVDETGKL LDTATIYPHQ
     PQRQVAQSEA TVLALITKYN VNLIAIGNGT ASRESDSFVT TLLKDNNLKI QSVMVSEAGA
     SVYSASELAA NEFPNLDVSL RGAVSIGRRL QDPLAELVKI DPKSIGVGQY QHDVSQSMLA
     KRLDAVVEDC VNAVGVDVNT ASPALLTRVA GLNGTIAQNI VNYRDENGRF EARTTLKKVA
     RLGPKAFEQC AGFLRIMSGK NPLDSSAVHP ESYTVVKNIA AANDKALDAI IGNSEFLRGL
     KAADYIDDKF GLPTVTDIIS ELDKPGRDPR PEFKTATFAE GVNEVKDLVP GMILEGVITN
     VTNFGAFVDV GVHQDGLVHI SALSDKFVSD PREVVKAGDI VKVKVMEVDL QRKRIGMSMR
     LNDEPGQEKP ARKPQGQRQQ PREQRQPRNN PRNAPAGNSA MGGAFAAAFA NAKKK
//