ID L8JNS9_9BACT Unreviewed; 520 AA.
AC L8JNS9;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE SubName: Full=Cytoplasmic axial filament protein CafA and Ribonuclease G {ECO:0000313|EMBL:ELR69823.1};
GN ORFNames=C900_04526 {ECO:0000313|EMBL:ELR69823.1};
OS Fulvivirga imtechensis AK7.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Fulvivirgaceae;
OC Fulvivirga.
OX NCBI_TaxID=1237149 {ECO:0000313|EMBL:ELR69823.1, ECO:0000313|Proteomes:UP000011135};
RN [1] {ECO:0000313|EMBL:ELR69823.1, ECO:0000313|Proteomes:UP000011135}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AK7 {ECO:0000313|EMBL:ELR69823.1,
RC ECO:0000313|Proteomes:UP000011135};
RA Nupur N., Khatri I., Kumar R., Subramanian S., Pinnaka A.;
RT "Genome assembly of Fulvivirga imtechensis AK7.";
RL Submitted (DEC-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|ARBA:ARBA00001946};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ELR69823.1}.
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DR EMBL; AMZN01000066; ELR69823.1; -; Genomic_DNA.
DR RefSeq; WP_009581714.1; NZ_AMZN01000066.1.
DR AlphaFoldDB; L8JNS9; -.
DR STRING; 1237149.C900_04526; -.
DR PATRIC; fig|1237149.3.peg.4041; -.
DR eggNOG; COG1530; Bacteria.
DR OrthoDB; 9804278at2; -.
DR Proteomes; UP000011135; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0004540; F:RNA nuclease activity; IEA:InterPro.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd04453; S1_RNase_E; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 3.40.1260.20; Ribonuclease E, catalytic domain; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR019307; RNA-bd_AU-1/RNase_E/G.
DR InterPro; IPR004659; RNase_E/G.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00757; RNaseEG; 1.
DR PANTHER; PTHR30001; RIBONUCLEASE; 1.
DR PANTHER; PTHR30001:SF0; RIBONUCLEASE G; 1.
DR Pfam; PF10150; RNase_E_G; 1.
DR SMART; SM00316; S1; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000011135};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 37..141
FT /note="S1 motif"
FT /evidence="ECO:0000259|SMART:SM00316"
SQ SEQUENCE 520 AA; 59002 MW; 33060F9AAE268646 CRC64;
MSNELIINST QNGCRIALLK DKSLVEFHHD EDGTQFSVGD IYLGTVKKVV QGLNAAFIDI
GYEKDAFLHY LDLGPKFSSL HEFTKRAVSK KNTSSRLEKF GLKPDIDKHG KIGNVLSRNQ
QILVQVVKEP ISTKGPRLSC ELSLAGRYLV LVPFSNTVNV SKKIGSSDER KRLVRLVSSI
KPENYGVIIR TVAEGKDVRE LDTDLRNLLN TWHEGAKALR TAKPREKVIG EMSKASAILR
DVLNESFDNI HIDDKEIYDE VKSYIKTIAP DKEKIVKYYN GKSKIFENFG IERQIKSAFG
QSVSLKGGGY LIVEHTEALH VIDVNSGNKS NREEDQEATA LSVNIEAAKE IARQLRLRDM
GGIIVVDFID MKRAENKKLI YKKIKEEMAA DRSKFTVLPL SKFGLMQITR QRVRPEMNIA
TKEVCPTCQG TGKISASILV SDQIERSVDY LMTKQNDRDI TVVVHPFIYA YFTKGTLSRR
LKWFMKYFKW IKMIQDSSMG VTEFKFLNKF GEEIEVSNLQ
//
