ID L8LIF9_9CHRO Unreviewed; 272 AA.
AC L8LIF9;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE SubName: Full=Phycobilisome Linker polypeptide {ECO:0000313|EMBL:ELR96652.1};
GN ORFNames=GLO73106DRAFT_00004480 {ECO:0000313|EMBL:ELR96652.1};
OS Gloeocapsa sp. PCC 73106.
OC Bacteria; Cyanobacteriota; Cyanophyceae; Oscillatoriophycideae;
OC Chroococcales; Chroococcaceae; Gloeocapsa.
OX NCBI_TaxID=102232 {ECO:0000313|EMBL:ELR96652.1, ECO:0000313|Proteomes:UP000011180};
RN [1] {ECO:0000313|EMBL:ELR96652.1, ECO:0000313|Proteomes:UP000011180}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PCC 73106 {ECO:0000313|EMBL:ELR96652.1,
RC ECO:0000313|Proteomes:UP000011180};
RX PubMed=23277585; DOI=10.1073/pnas.1217107110;
RA Shih P.M., Wu D., Latifi A., Axen S.D., Fewer D.P., Talla E., Calteau A.,
RA Cai F., Tandeau de Marsac N., Rippka R., Herdman M., Sivonen K.,
RA Coursin T., Laurent T., Goodwin L., Nolan M., Davenport K.W., Han C.S.,
RA Rubin E.M., Eisen J.A., Woyke T., Gugger M., Kerfeld C.A.;
RT "Improving the coverage of the cyanobacterial phylum using diversity-driven
RT genome sequencing.";
RL Proc. Natl. Acad. Sci. U.S.A. 110:1053-1058(2013).
CC -!- SUBCELLULAR LOCATION: Cellular thylakoid membrane
CC {ECO:0000256|ARBA:ARBA00004445}; Peripheral membrane protein
CC {ECO:0000256|ARBA:ARBA00004445}; Cytoplasmic side
CC {ECO:0000256|ARBA:ARBA00004445}. Membrane
CC {ECO:0000256|ARBA:ARBA00004287}; Peripheral membrane protein
CC {ECO:0000256|ARBA:ARBA00004287}; Cytoplasmic side
CC {ECO:0000256|ARBA:ARBA00004287}.
CC -!- SIMILARITY: Belongs to the phycobilisome linker protein family.
CC {ECO:0000256|PROSITE-ProRule:PRU00775}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ELR96652.1}.
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DR EMBL; ALVY01000224; ELR96652.1; -; Genomic_DNA.
DR RefSeq; WP_006530507.1; NZ_ALVY01000224.1.
DR AlphaFoldDB; L8LIF9; -.
DR STRING; 102232.GLO73106DRAFT_00004480; -.
DR PATRIC; fig|102232.3.peg.3529; -.
DR eggNOG; COG0237; Bacteria.
DR OrthoDB; 420396at2; -.
DR Proteomes; UP000011180; Unassembled WGS sequence.
DR GO; GO:0030089; C:phycobilisome; IEA:UniProtKB-UniRule.
DR GO; GO:0031676; C:plasma membrane-derived thylakoid membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0015979; P:photosynthesis; IEA:InterPro.
DR Gene3D; 1.10.3130.20; Phycobilisome linker domain; 1.
DR InterPro; IPR008213; CpcD-like_dom.
DR InterPro; IPR001297; PBS_linker_dom.
DR InterPro; IPR038255; PBS_linker_sf.
DR InterPro; IPR016470; Phycobilisome.
DR PANTHER; PTHR34011:SF5; PHYCOBILISOME 32.1 KDA LINKER POLYPEPTIDE, PHYCOCYANIN-ASSOCIATED, ROD 2; 1.
DR PANTHER; PTHR34011; PHYCOBILISOME 32.1 KDA LINKER POLYPEPTIDE, PHYCOCYANIN-ASSOCIATED, ROD 2-RELATED; 1.
DR Pfam; PF01383; CpcD; 1.
DR Pfam; PF00427; PBS_linker_poly; 1.
DR PIRSF; PIRSF005898; Phycobilisome_CpeC/CpcI; 1.
DR SMART; SM01094; CpcD; 1.
DR PROSITE; PS51441; CPCD_LIKE; 1.
DR PROSITE; PS51445; PBS_LINKER; 1.
PE 3: Inferred from homology;
KW Antenna complex {ECO:0000256|ARBA:ARBA00022549};
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Phycobilisome {ECO:0000256|ARBA:ARBA00022738, ECO:0000256|PROSITE-
KW ProRule:PRU00775}; Reference proteome {ECO:0000313|Proteomes:UP000011180};
KW Thylakoid {ECO:0000256|ARBA:ARBA00023078}.
FT DOMAIN 1..180
FT /note="PBS-linker"
FT /evidence="ECO:0000259|PROSITE:PS51445"
FT DOMAIN 220..272
FT /note="CpcD-like"
FT /evidence="ECO:0000259|PROSITE:PS51441"
SQ SEQUENCE 272 AA; 30897 MW; 0E651760E04DC6B3 CRC64;
MAITTAASRL GVSAFADAKP VELLPNWNQE EAKIAIRAIY RQVLGNDHLM SSERLTSAES
LLYNRSITVQ EFVRMLAKSE LYKSKFFYNT YHPRMIELNF KHLLGRAPYD EAEIIEHLDI
YQNQGFEADI DSYLDSIEYN ENFGENVVPY YRGFSTQRGQ KTVGFPRMFQ LYRGYANSDR
AQSNSGAPRL TYDLARNTAS PVSNAEVGLT LGGTTTSDRG DMYRIRVTQG AKGRSPQLRR
SVKEYVVPYE RLSLTMQKLN QSGCQILSLT HA
//
