ID L8WQ29_THACA Unreviewed; 610 AA.
AC L8WQ29;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE RecName: Full=RNA polymerase II transcription factor B subunit 5 {ECO:0000256|ARBA:ARBA00033339};
GN ORFNames=AG1IA_07097 {ECO:0000313|EMBL:ELU38873.1};
OS Thanatephorus cucumeris (strain AG1-IA) (Rice sheath blight fungus)
OS (Rhizoctonia solani).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC Cantharellales; Ceratobasidiaceae; Rhizoctonia; Rhizoctonia solani AG-1.
OX NCBI_TaxID=983506 {ECO:0000313|EMBL:ELU38873.1, ECO:0000313|Proteomes:UP000011668};
RN [1] {ECO:0000313|EMBL:ELU38873.1, ECO:0000313|Proteomes:UP000011668}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AG-1 IA {ECO:0000313|Proteomes:UP000011668};
RX PubMed=23361014; DOI=10.1038/ncomms2427;
RA Zheng A., Lin R., Xu L., Qin P., Tang C., Ai P., Zhang D., Liu Y., Sun Z.,
RA Feng H., Wang Y., Chen Y., Liang X., Fu R., Li Q., Zhang J., Yu X., Xie Z.,
RA Ding L., Guan P., Tang J., Liang Y., Wang S., Deng Q., Li S., Zhu J.,
RA Wang L., Liu H., Li P.;
RT "The evolution and pathogenic mechanisms of the rice sheath blight
RT pathogen.";
RL Nat. Commun. 4:1424-1424(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ELU38873.1}.
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DR EMBL; AFRT01002010; ELU38873.1; -; Genomic_DNA.
DR AlphaFoldDB; L8WQ29; -.
DR STRING; 983506.L8WQ29; -.
DR HOGENOM; CLU_447720_0_0_1; -.
DR Proteomes; UP000011668; Unassembled WGS sequence.
DR GO; GO:0000439; C:transcription factor TFIIH core complex; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR GO; GO:0006367; P:transcription initiation at RNA polymerase II promoter; IEA:InterPro.
DR Gene3D; 1.10.30.10; High mobility group box domain; 2.
DR Gene3D; 3.30.70.1220; TFB5-like; 1.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR InterPro; IPR035935; TFB5-like_sf.
DR InterPro; IPR009400; TFIIH_TTDA/Tfb5.
DR PANTHER; PTHR48112; HIGH MOBILITY GROUP PROTEIN DSP1; 1.
DR PANTHER; PTHR48112:SF32; HIGH MOBILITY GROUP PROTEIN DSP1; 1.
DR Pfam; PF06331; Tfb5; 1.
DR SMART; SM00398; HMG; 2.
DR SMART; SM01395; Tbf5; 1.
DR SUPFAM; SSF47095; HMG-box; 2.
DR SUPFAM; SSF142897; TFB5-like; 1.
DR PROSITE; PS50118; HMG_BOX_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Reference proteome {ECO:0000313|Proteomes:UP000011668}.
FT DOMAIN 514..598
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 514..598
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 284..428
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 308..339
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 346..414
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 610 AA; 68499 MW; 47174C819F568BDA CRC64;
MLSLALPLSY YGHLIGFNEP FGPSSNHSSI VTVEPYKQEH TVLVNCTPNV NLKEHALANI
EFAQSRPPYA LRLSRIVISR VENVWPSWMT KQRHGAYTRW YRNNRTRMRA FKGVLLTCDP
AVKQILLILD KMPGQGGFII KDIDDTHVLV RADDVKRIRI ALEQESEYRR IRRSGMRAAQ
RRHSKVLIFW ETSAAGRPST STTGRFGLAL LMPGPADPEP VWHPRSLISR TVRGNAQTRH
SVYTLCLAGT MLSARTLLMR PVLYAHTSTQ IRAFSLARIA LEPVRKATPP PPPPPAAKGK
AGAAAIKYAT KSTSTDKTAA PAKKASSATT KTTSASASAA PAPAKRVRLT EKERAARDRG
REREKIAKQK EREREREKAR KAKEREKEHE KKEKAKAREL AKKEKEKAKA EMAKAIKKPY
PPPPRAPATA YLLFTSDRTV DRDRGEGVTE DAIKASQAWK DLSDVYTKKA EQARAAWKED
VAKWVSTLNL AQLHAARANR EPGTRDDAAL NVLPKRPGNG YALFLSDVTS RQDFRDKVDA
LVKKEHPKDE KDLVQKRISL YGRTSADIWR SMSDKEKVYS NKATEAKAQW DKKFGHLIAE
QKEEIAAAHQ
//
