GenomeNet

Database: UniProt
Entry: L8Y8Y5_TUPCH
LinkDB: L8Y8Y5_TUPCH
Original site: L8Y8Y5_TUPCH 
ID   L8Y8Y5_TUPCH            Unreviewed;       381 AA.
AC   L8Y8Y5;
DT   03-APR-2013, integrated into UniProtKB/TrEMBL.
DT   03-APR-2013, sequence version 1.
DT   11-DEC-2019, entry version 32.
DE   RecName: Full=LIM zinc-binding domain-containing protein {ECO:0000259|PROSITE:PS50023};
GN   ORFNames=TREES_T100018132 {ECO:0000313|EMBL:ELV12712.1};
OS   Tupaia chinensis (Chinese tree shrew).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia.
OX   NCBI_TaxID=246437 {ECO:0000313|EMBL:ELV12712.1, ECO:0000313|Proteomes:UP000011518};
RN   [1] {ECO:0000313|Proteomes:UP000011518}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Zhang G., Fan Y., Yao Y., Huang Z.;
RT   "Genome of the Chinese tree shrew, a rising model animal genetically
RT   related to primates.";
RL   Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Proteomes:UP000011518}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=23385571; DOI=10.1038/ncomms2416;
RA   Fan Y., Huang Z.Y., Cao C.C., Chen C.S., Chen Y.X., Fan D.D., He J.,
RA   Hou H.L., Hu L., Hu X.T., Jiang X.T., Lai R., Lang Y.S., Liang B.,
RA   Liao S.G., Mu D., Ma Y.Y., Niu Y.Y., Sun X.Q., Xia J.Q., Xiao J.,
RA   Xiong Z.Q., Xu L., Yang L., Zhang Y., Zhao W., Zhao X.D., Zheng Y.T.,
RA   Zhou J.M., Zhu Y.B., Zhang G.J., Wang J., Yao Y.G.;
RT   "Genome of the Chinese tree shrew.";
RL   Nat. Commun. 4:1426-1426(2013).
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DR   EMBL; KB364389; ELV12712.1; -; Genomic_DNA.
DR   STRING; 246437.XP_006164281.1; -.
DR   InParanoid; L8Y8Y5; -.
DR   Proteomes; UP000011518; Unassembled WGS sequence.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   InterPro; IPR027996; DUF4509.
DR   InterPro; IPR028100; DUF4510.
DR   InterPro; IPR001781; Znf_LIM.
DR   Pfam; PF14970; DUF4509; 1.
DR   Pfam; PF14971; DUF4510; 1.
DR   Pfam; PF00412; LIM; 1.
DR   SMART; SM00132; LIM; 1.
DR   PROSITE; PS00478; LIM_DOMAIN_1; 1.
DR   PROSITE; PS50023; LIM_DOMAIN_2; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   LIM domain {ECO:0000256|PROSITE-ProRule:PRU00125,
KW   ECO:0000256|SAAS:SAAS00113461};
KW   Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00125,
KW   ECO:0000256|SAAS:SAAS00113326};
KW   Reference proteome {ECO:0000313|Proteomes:UP000011518};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00125, ECO:0000256|SAAS:SAAS00474801}.
FT   DOMAIN          2..63
FT                   /note="LIM zinc-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS50023"
FT   COILED          179..199
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          242..265
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   381 AA;  42669 MW;  BA841D191D610DA1 CRC64;
     MPKCPKCDKE VYFAERVTSL GKDWHRPCLK CEKCGKTLTS GGHAEHEGKP YCNHPCYSAM
     FGPKETRAHW VKLALHSRGY PRLALAQIPE DGSQGSRELL LALSWLLARG PLPEQLLAQT
     HVQLGDQVPV CECEALASPG PPAPHVEVEG PVDIRQVQWL MGKLRLRWRQ LMCSQQEQCA
     LLSKLLRRLE SENARLEAAL RWRCQEPVFW QWMNTVLEAC ALEATAPASQ TPYLPRIPER
     GASELEQLAR ELQALLEELR EAVEPRRAAW AARGGQAQGP EWNAAQQALQ EAVRQELAAL
     QLSWEQDWGP DPPHGPHRLV RSKDRAPAGR GLQAAQVIGV LRSREAFLEA ALRRLQGQCQ
     QELVRLVGAL PGLIWIPPPA R
//
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