GenomeNet

Database: UniProt
Entry: L9KN20_TUPCH
LinkDB: L9KN20_TUPCH
Original site: L9KN20_TUPCH 
ID   L9KN20_TUPCH            Unreviewed;       303 AA.
AC   L9KN20;
DT   03-APR-2013, integrated into UniProtKB/TrEMBL.
DT   03-APR-2013, sequence version 1.
DT   24-JAN-2024, entry version 26.
DE   SubName: Full=THUMP domain-containing protein 1 {ECO:0000313|EMBL:ELW62517.1};
GN   ORFNames=TREES_T100019472 {ECO:0000313|EMBL:ELW62517.1};
OS   Tupaia chinensis (Chinese tree shrew).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia.
OX   NCBI_TaxID=246437 {ECO:0000313|EMBL:ELW62517.1, ECO:0000313|Proteomes:UP000011518};
RN   [1] {ECO:0000313|Proteomes:UP000011518}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Zhang G., Fan Y., Yao Y., Huang Z.;
RT   "Genome of the Chinese tree shrew, a rising model animal genetically
RT   related to primates.";
RL   Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Proteomes:UP000011518}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=23385571; DOI=10.1038/ncomms2416;
RA   Fan Y., Huang Z.Y., Cao C.C., Chen C.S., Chen Y.X., Fan D.D., He J.,
RA   Hou H.L., Hu L., Hu X.T., Jiang X.T., Lai R., Lang Y.S., Liang B.,
RA   Liao S.G., Mu D., Ma Y.Y., Niu Y.Y., Sun X.Q., Xia J.Q., Xiao J.,
RA   Xiong Z.Q., Xu L., Yang L., Zhang Y., Zhao W., Zhao X.D., Zheng Y.T.,
RA   Zhou J.M., Zhu Y.B., Zhang G.J., Wang J., Yao Y.G.;
RT   "Genome of the Chinese tree shrew.";
RL   Nat. Commun. 4:1426-1426(2013).
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DR   EMBL; KB320811; ELW62517.1; -; Genomic_DNA.
DR   AlphaFoldDB; L9KN20; -.
DR   STRING; 246437.L9KN20; -.
DR   eggNOG; KOG3943; Eukaryota.
DR   InParanoid; L9KN20; -.
DR   Proteomes; UP000011518; Unassembled WGS sequence.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006400; P:tRNA modification; IEA:InterPro.
DR   CDD; cd11717; THUMP_THUMPD1_like; 1.
DR   Gene3D; 3.30.2300.10; THUMP superfamily; 1.
DR   InterPro; IPR004114; THUMP_dom.
DR   InterPro; IPR040183; THUMPD1-like.
DR   PANTHER; PTHR13452; THUMP DOMAIN CONTAINING PROTEIN 1-RELATED; 1.
DR   PANTHER; PTHR13452:SF10; THUMP DOMAIN-CONTAINING PROTEIN 1; 1.
DR   Pfam; PF02926; THUMP; 1.
DR   SMART; SM00981; THUMP; 1.
DR   SUPFAM; SSF143437; THUMP domain-like; 1.
DR   PROSITE; PS51165; THUMP; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000011518};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00529}.
FT   DOMAIN          96..203
FT                   /note="THUMP"
FT                   /evidence="ECO:0000259|PROSITE:PS51165"
FT   REGION          17..43
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          219..303
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        247..275
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        276..290
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   303 AA;  34443 MW;  328E6A2F3E079F5A CRC64;
     MNERKCVEEA YSLLNEYGDD MYGPEKFTDK DQQLSESEGD DDDMEAALKK EVDDIKASTA
     MRLRRFQSVE SGANNVVFIR TLGIEPEKLV HHILQDMYKT KKKKTRVILR MLPISGTCKA
     FLEDMKKYAE TFLEPWFKAP NKGTFQIVYK SRNNSHMNRE EVIKELAGIV SSLNSENKVD
     LTNPQYTVVV EIIKAVCCLS VVKDYMLFRK YNLQEVVKSA KEPSQVNPKQ GNGKEAKLES
     GDKLNQNDLT EGKNNQQEVP ENNEELGQTK PVSETEVVNE GEDKPELANQ VTEESKSNES
     VLS
//
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