ID L9WJQ5_9EURY Unreviewed; 671 AA.
AC L9WJQ5;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 24-JAN-2024, entry version 43.
DE SubName: Full=PAS sensor protein {ECO:0000313|EMBL:ELY49607.1};
GN ORFNames=C495_00220 {ECO:0000313|EMBL:ELY49607.1};
OS Natronorubrum sulfidifaciens JCM 14089.
OC Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Natrialbales;
OC Natrialbaceae; Natronorubrum.
OX NCBI_TaxID=1230460 {ECO:0000313|EMBL:ELY49607.1, ECO:0000313|Proteomes:UP000011661};
RN [1] {ECO:0000313|EMBL:ELY49607.1, ECO:0000313|Proteomes:UP000011661}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 14089 {ECO:0000313|EMBL:ELY49607.1,
RC ECO:0000313|Proteomes:UP000011661};
RX PubMed=25393412; DOI=10.1371/journal.pgen.1004784;
RA Becker E.A., Seitzer P.M., Tritt A., Larsen D., Krusor M., Yao A.I., Wu D.,
RA Madern D., Eisen J.A., Darling A.E., Facciotti M.T.;
RT "Phylogenetically driven sequencing of extremely halophilic archaea reveals
RT strategies for static and dynamic osmo-response.";
RL PLoS Genet. 10:E1004784-E1004784(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ELY49607.1}.
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DR EMBL; AOHX01000001; ELY49607.1; -; Genomic_DNA.
DR RefSeq; WP_008158845.1; NZ_AOHX01000001.1.
DR AlphaFoldDB; L9WJQ5; -.
DR STRING; 1230460.C495_00220; -.
DR PATRIC; fig|1230460.4.peg.47; -.
DR eggNOG; arCOG02278; Archaea.
DR eggNOG; arCOG02387; Archaea.
DR OrthoDB; 106505at2157; -.
DR Proteomes; UP000011661; Unassembled WGS sequence.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR031803; BAT_GAF/HTH-assoc.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR007050; HTH_bacterioopsin.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR34236; DIMETHYL SULFOXIDE REDUCTASE TRANSCRIPTIONAL ACTIVATOR; 1.
DR PANTHER; PTHR34236:SF1; DIMETHYL SULFOXIDE REDUCTASE TRANSCRIPTIONAL ACTIVATOR; 1.
DR Pfam; PF15915; BAT; 1.
DR Pfam; PF13185; GAF_2; 1.
DR Pfam; PF04967; HTH_10; 1.
DR Pfam; PF08448; PAS_4; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
DR PROSITE; PS50113; PAC; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000011661};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 219..270
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
SQ SEQUENCE 671 AA; 74164 MW; 59E425C4A7278747 CRC64;
MTDENRPGLI IHVAATDSSS LERRLRESTT LGVRSVSPEA ALETVFGSKT ETREKESSTC
PAGVVVELDC PTRTKAILER ATTRYPAAPS VVVPPSGSET LAATALRADA DEYIPADHED
DPIERVLETL SSSQSTDTEP EQTDRKYHHI LANELPDEAF VLADDGTYLK SKVRPGTADR
YSVSADELTG HRLEDVYPDD TAAKLEGCID ETLETGDIQS IEYTVEATDG RRRYEGRVVP
IDERINGQRA VVWLARDITE RARRERRLRS RQNQLETLNR INSVVGQVIE TLVEARSRDA
IEHEVCAQLV DSELYCGSWI AERTGEGTLT YRNGTGSAET YLEYVSESEV DHGWLARRAV
QTGTIQTQPG LTESESVPDL LREGAREDDV KAAIAVPISY NESIYGVLTV LASREEAFTE
GEQAGFGLLG ETIGFTIMAM RNRQLLFADT VIELEFRIDG GDTFSFDLSR KYDCTCSLEW
AGTTSGGRTV QYVTVAGLDC ETVLEAADAH ESVEECRRIH DGGESCTIEL RLAESGVQAL
ANHGATIREI TVEDGVSTCL IEVSQDANVR EIADTLTVVY ENAELVARRE VDRPVRTAAE
RCNRILDQLT DRQLTTLRLA YYSGFFDWPR ESTGEEIAES MDVTPPTMHQ HLRKGLKTVL
GEFFETDGDG P
//
