ID L9XHS4_9EURY Unreviewed; 831 AA.
AC L9XHS4;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 46.
DE SubName: Full=PAS/PAC sensor protein {ECO:0000313|EMBL:ELY61294.1};
GN ORFNames=C493_02401 {ECO:0000313|EMBL:ELY61294.1};
OS Natronolimnohabitans innermongolicus JCM 12255.
OC Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Natrialbales;
OC Natrialbaceae; Natronolimnohabitans.
OX NCBI_TaxID=1227499 {ECO:0000313|EMBL:ELY61294.1, ECO:0000313|Proteomes:UP000011602};
RN [1] {ECO:0000313|EMBL:ELY61294.1, ECO:0000313|Proteomes:UP000011602}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 12255 {ECO:0000313|EMBL:ELY61294.1,
RC ECO:0000313|Proteomes:UP000011602};
RX PubMed=25393412; DOI=10.1371/journal.pgen.1004784;
RA Becker E.A., Seitzer P.M., Tritt A., Larsen D., Krusor M., Yao A.I., Wu D.,
RA Madern D., Eisen J.A., Darling A.E., Facciotti M.T.;
RT "Phylogenetically driven sequencing of extremely halophilic archaea reveals
RT strategies for static and dynamic osmo-response.";
RL PLoS Genet. 10:E1004784-E1004784(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ELY61294.1}.
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DR EMBL; AOHZ01000012; ELY61294.1; -; Genomic_DNA.
DR RefSeq; WP_007257791.1; NZ_AOHZ01000012.1.
DR AlphaFoldDB; L9XHS4; -.
DR STRING; 1227499.C493_02401; -.
DR PATRIC; fig|1227499.3.peg.493; -.
DR eggNOG; arCOG02276; Archaea.
DR eggNOG; arCOG06712; Archaea.
DR OrthoDB; 165911at2157; -.
DR Proteomes; UP000011602; Unassembled WGS sequence.
DR CDD; cd00130; PAS; 3.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 3.
DR InterPro; IPR031803; BAT_GAF/HTH-assoc.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR007050; HTH_bacterioopsin.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR NCBIfam; TIGR00229; sensory_box; 3.
DR PANTHER; PTHR34236; DIMETHYL SULFOXIDE REDUCTASE TRANSCRIPTIONAL ACTIVATOR; 1.
DR PANTHER; PTHR34236:SF1; DIMETHYL SULFOXIDE REDUCTASE TRANSCRIPTIONAL ACTIVATOR; 1.
DR Pfam; PF15915; BAT; 1.
DR Pfam; PF13185; GAF_2; 1.
DR Pfam; PF04967; HTH_10; 1.
DR Pfam; PF08448; PAS_4; 2.
DR Pfam; PF13426; PAS_9; 1.
DR SMART; SM00086; PAC; 2.
DR SMART; SM00091; PAS; 3.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 3.
DR PROSITE; PS50113; PAC; 2.
DR PROSITE; PS50112; PAS; 3.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000011602};
KW Transcription {ECO:0000256|ARBA:ARBA00023015};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 42..99
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 168..238
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 250..302
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 303..373
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 376..428
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT COILED 419..449
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 831 AA; 92571 MW; 7059FC6296BC4EAF CRC64;
MNDPSVGENG GSDAADVTSI DESSTLRLDA GRLDDFVSDQ VVWLLDRDGL VSMWNDGAAD
LLGYSSDEIV GTHVRKLYPP ARRETDRAKQ LLERARREGQ VQVDGWRCRR DGSRLWGRET
IVPIREDEID GGAEERDVDR DEPSVVGYAC LLADRTDEYE RKLELDEEKR LTESVFESQP
DVVYAFDADG NFLRWNDRVP EVTGYDDDEL AEMEPLEFIS PDDRDRVADA IASLLERSDS
GAGADADAYA TLEADLLTKD GERIPHEFSS GRLTDDDGTV LGFTGIARDV RERRAREREL
REEKALTESI FEAQPDILYA YTADGNLIQW NDRFEELTTY DSDDLEGLNP LEFIAPGDRP
QIGDAIDRIL HEREHVTAEA RIIASDGQQI PYEFNSAPMT DDDGTVLGFT GVGRDISDRK
ARERELERLE RLNATIRRVD ETIVAAESRE EIETAIVEAF ADADPARFAA IGRVEPAADD
DSWELRASAD LDAESDPAAE ALLATYVDPP TDDGRSLLET GTVERYRDLQ ESDVDVWRED
ARERDYGAVA AVPIVASGRT YGAFILGAAE SSAFTDREAE VLQEFGGTIG HAINAMAVRR
LLYQDTVVEL EFESTGRPGV CVDLSRDVDC RVALEHVLPL TDEMFVYYVT VDGAEPTAVR
SFAAEYDSID EYRHIDSDGE ESNWEFVVEG PTMTGLLADY GARLRAQTVD DGVSSTVVQA
SPDVDVRELV DAVTAAYPGT ELASKRTVER PVETSGDFRQ RVQAELTDKQ QAALEAAYYA
GYFDWPTRRS DASDVADRLG IARQTFHQHL RVAQEKLLTA YFESGIDERR S
//
