ID M1AAG6_SOLTU Unreviewed; 1569 AA.
AC M1AAG6;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 24-JAN-2024, entry version 46.
DE SubName: Full=DNA binding protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400018346};
GN Name=102582627 {ECO:0000313|EnsemblPlants:PGSC0003DMT400018346};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400018346, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400018346}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400018346};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
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DR RefSeq; XP_006347254.1; XM_006347192.2.
DR STRING; 4113.M1AAG6; -.
DR PaxDb; 4113-PGSC0003DMT400018346; -.
DR EnsemblPlants; PGSC0003DMT400018346; PGSC0003DMT400018346; PGSC0003DMG400007126.
DR GeneID; 102582627; -.
DR Gramene; PGSC0003DMT400018346; PGSC0003DMT400018346; PGSC0003DMG400007126.
DR KEGG; sot:102582627; -.
DR eggNOG; KOG1473; Eukaryota.
DR HOGENOM; CLU_002742_1_0_1; -.
DR InParanoid; M1AAG6; -.
DR OMA; NASICHK; -.
DR OrthoDB; 450464at2759; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR GO; GO:0000785; C:chromatin; IEA:UniProt.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd15489; PHD_SF; 1.
DR CDD; cd20401; Tudor_AtPTM-like; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR018501; DDT_dom.
DR InterPro; IPR047365; Tudor_AtPTM-like.
DR InterPro; IPR028942; WHIM1_dom.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46508:SF12; DDT DOMAIN-CONTAINING PROTEIN PTM-LIKE ISOFORM X1; 1.
DR PANTHER; PTHR46508; PHD FINGER FAMILY PROTEIN; 1.
DR Pfam; PF02791; DDT; 1.
DR Pfam; PF00628; PHD; 1.
DR Pfam; PF21743; PTM_DIR17_Tudor; 1.
DR Pfam; PF15612; WHIM1; 1.
DR SMART; SM00571; DDT; 1.
DR SMART; SM00249; PHD; 4.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 2.
DR PROSITE; PS50827; DDT; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 198..258
FT /note="DDT"
FT /evidence="ECO:0000259|PROSITE:PS50827"
FT DOMAIN 424..471
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT REGION 1..25
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1155..1182
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1359..1388
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1160..1182
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1569 AA; 175353 MW; 953A96A845F85A84 CRC64;
MRASVDRSVR RGRKRRQNYV QNDQVDPNGK KRAIVLRPKA FLGTYVRKEF KGCGKYMGKI
ISYDTGLYKI VYEDGDFEDM DSSEVRVVSF EDDELNGQWL KRKKKLDKLV ARMEATSTKS
CVENPAEPVN GVIDKFEPKD RGIGCSDKLE VNHQGRDSDL VSDLSEYYME QDLSSGVEVP
LIPAPQLPPS SDSIGIPEEY VSYLLSVYSF LRSFSIRLFL YPFGLEDFVG ALNCSAPNTL
FDSVHVALMC ALRRHLNKLS SDDSVLASKC LRGIDWGLLD TMTWPVFLVH YLTVMGYIEQ
PGWKGFYPHT LQREYYLLSA GRKIMVLQIL CDDVLESEEI RTEINTREES KLAIESDILT
DVACVSAPRI VHPRYAKTSA CKEQEATELC KENHERKQGC STDSLGPKVS NQDYVSGVVQ
NSNSDECCLC AMEGTLLCCD GCPSSYHARC IGVSKTHIPE GEWYCPECTI NKIEPKITRG
TTLKGAELFG VDSYGQIFMG TCSHLLVLKA LAGADSIFRY YNEKGIPKVL LALNANAQHS
TLYLEICKGI MQYWKIPGNV FFPDGELSEI GSDRPNGTKC TSFSTLSLSS LIKGSAEQVG
VEYIAPGGCF YMGSSFKPQQ YINSYLHGDF AASAAANLAE LSPGENQGTE SHASDNRQKL
SANALLQAKA FSSATTRFFW PNTEKKVVEV PRERCSWCLN CKAAVTSKKG CLLNAAASNA
IKGAVKILAD LRSASVGEGN LRGIATYIIL MEEGLCGLTV GPFLSTAFRK KWRKQAEEAT
SCTVIKSLLL QFEENIRFVA FSGDWFKLVD CGTSESSITH STAGVVESSH RHKSRRRGRK
PSLMVKVTAD DCKNKLKDFT WWRGGILSKL LLQKATLPRS MLKKAARHGG LRKIPGIYDA
EGSKTAKISR QLAWRAAVDV CKTISQLALQ VRYLDMHVRW SDLVSPEQSL LDGKGPESEA
SSFRNASICH KRIVENEVRY SVAFGNQKHL PSRVKKSIVE VEQSQEEGKE KYWFSESRIP
LYLIKNYEEN LEKDLPSANK FADALPKLQK RCLVASCKDI YSYLAQKRDG NAKYCCASCE
TDVLLRNVVK CNTCQGLCHK QCTISSTVIA NEETEFMTSC KQCYQNTALT QAESSHESPT
SPLLMQGKDI PIPVSARKGG KVGSSSNPSA STATLKHSSK VKHASSNLAT RWKHHWGVIW
RKNNEDTGDF RFKHILLRGN PDCGSVRPSC RLCCKPYDPY LMYIHCETCT YWYHAEAVEL
EESKIFEVVG FKCCKCRRIK MPICPYFDPT SKRQVVEKRT CAKASKMDRQ GIDSGFISEL
QKDENMATPA LEDNKPLSAV EELTEHFPVG DCERNVETMS VPGQREQSVR SHIENETDLK
SSELSTPLGG GNIVFPKDEM PTHVEPGAKQ PVRRHIRLEK DSDTPFASDP LNVLRNTSRE
SSEEYGHGCK YMEFEPQTCF SFNELLASDD LGPLDGVDSS ATLNKDVETS SRFLPNKNAD
TSYVEHEPAV STIPTAAFAV PCKMCSRKEP CPDLCCETCE IWIHRHCSPW NDEESGEDDW
KCGNCREWR
//
