ID   M1AN41_SOLTU            Unreviewed;       748 AA.
AC   M1AN41;
DT   03-APR-2013, integrated into UniProtKB/TrEMBL.
DT   03-APR-2013, sequence version 1.
DT   27-MAR-2024, entry version 47.
DE   SubName: Full=Pentatricopeptide repeat domain containing protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400026395};
OS   Solanum tuberosum (Potato).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX   NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400026395, ECO:0000313|Proteomes:UP000011115};
RN   [1] {ECO:0000313|Proteomes:UP000011115}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX   PubMed=21743474; DOI=10.1038/nature10158;
RG   The Potato Genome Sequencing Consortium;
RT   "Genome sequence and analysis of the tuber crop potato.";
RL   Nature 475:189-195(2011).
RN   [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400026395}
RP   IDENTIFICATION.
RC   STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400026395};
RG   EnsemblPlants;
RL   Submitted (JUN-2015) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC       {ECO:0000256|ARBA:ARBA00006643}.
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DR   AlphaFoldDB; M1AN41; -.
DR   STRING; 4113.M1AN41; -.
DR   PaxDb; 4113-PGSC0003DMT400026395; -.
DR   EnsemblPlants; PGSC0003DMT400026395; PGSC0003DMT400026395; PGSC0003DMG401010181.
DR   Gramene; PGSC0003DMT400026395; PGSC0003DMT400026395; PGSC0003DMG401010181.
DR   Gramene; RHC03H1G1738.2.1; RHC03H1G1738.2.1; RHC03H1G1738.2.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_15_0_1; -.
DR   InParanoid; M1AN41; -.
DR   OMA; SWVEIKH; -.
DR   Proteomes; UP000011115; Unassembled WGS sequence.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR   InterPro; IPR032867; DYW_dom.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR045215; PPR_prot_At1g15510.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 8.
DR   PANTHER; PTHR24015:SF1773; OS01G0101150 PROTEIN; 1.
DR   PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR   Pfam; PF14432; DYW_deaminase; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF01535; PPR; 3.
DR   Pfam; PF12854; PPR_1; 1.
DR   Pfam; PF13041; PPR_2; 4.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS51375; PPR; 7.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          36..70
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          137..171
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          238..272
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          339..373
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          440..474
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          511..541
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          578..612
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   DOMAIN          656..748
FT                   /note="DYW"
FT                   /evidence="ECO:0000259|Pfam:PF14432"
SQ   SEQUENCE   748 AA;  84511 MW;  BC3E471FEE8F658B CRC64;
     MPYRNTSSVN MMVSGYVKSR NLFRARELFD SMFSRNEVSW TIMIGGYSQN NQPKEAFNLY
     TEMCRSGVKP DHITFATLLS GFDDTTTLKE VLQIHSHIIR FGFSASLIVF NSLVDSYCKT
     CCLDIASQLF SEMPTKDSVS FNVMITGYTK YGFREEALKL FMQMRNMDFQ PSGFTFAAML
     GMSVGSEDVI FGQQIHGLAI KTSYVWDIFV ANALLDLYSK HDYIDLAKNL FDEMPQLDGV
     SYNIIITGYA WNGQYEKSFD LFKRLQGTSF DRKNFPFATM LSVAAIELNL SMGRQTHAQA
     VVTAAVSEVQ VGNALVDMYA KCEKFEDANR IFANLAYRNS VPWTAIISIY VQKGFHEEAL
     KMFKEMNREN VHGDQATFAS TLKASANLAS VSLGKQLHSS VIRLGLLSSV FSGSVLVDMY
     ANCGSMKDAI EVFKEMPDRN IVCWNALISA YAQNGNAEAT FSSFADMIES GLYPDSVSFL
     SVLTACSHRG LVEKALWYFN SMTQVYKLDP RRKHYATMID VLCRSGRFNE AENLISEMPF
     EPDEVMWSSV LNSCRIHKNQ DLAKKAADQL FKMDALRDAA AYVNMSNIYA EAGKWENAAK
     VKKAMRERGV KKVTAYSWVE IDHIVHVFTA NDRTHPQTEQ IRRKINSLVE LMDKEGYKPD
     TSCTLQNVDE EMKIESLKYH SERLAIAFAL INTPEGSPII IMKNLRACVD CHAAIKVISK
     IVGREITVRD SSRFHHFRDG SCSCGDYW
//