ID M1AQP9_SOLTU Unreviewed; 651 AA.
AC M1AQP9;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE RecName: Full=glycine hydroxymethyltransferase {ECO:0000256|ARBA:ARBA00012256};
DE EC=2.1.2.1 {ECO:0000256|ARBA:ARBA00012256};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400028093, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400028093}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400028093};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000256|ARBA:ARBA00001933};
CC -!- PATHWAY: One-carbon metabolism; tetrahydrofolate interconversion.
CC {ECO:0000256|ARBA:ARBA00004777}.
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DR AlphaFoldDB; M1AQP9; -.
DR STRING; 4113.M1AQP9; -.
DR PaxDb; 4113-PGSC0003DMT400028093; -.
DR EnsemblPlants; PGSC0003DMT400028093; PGSC0003DMT400028093; PGSC0003DMG400010835.
DR Gramene; PGSC0003DMT400028093; PGSC0003DMT400028093; PGSC0003DMG400010835.
DR eggNOG; KOG2467; Eukaryota.
DR HOGENOM; CLU_421165_0_0_1; -.
DR InParanoid; M1AQP9; -.
DR UniPathway; UPA00193; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0004372; F:glycine hydroxymethyltransferase activity; IBA:GO_Central.
DR GO; GO:0030170; F:pyridoxal phosphate binding; IBA:GO_Central.
DR GO; GO:0070905; F:serine binding; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IBA:GO_Central.
DR GO; GO:0046655; P:folic acid metabolic process; IBA:GO_Central.
DR GO; GO:0019264; P:glycine biosynthetic process from serine; IBA:GO_Central.
DR GO; GO:0006565; P:L-serine catabolic process; IBA:GO_Central.
DR GO; GO:0006730; P:one-carbon metabolic process; IBA:GO_Central.
DR GO; GO:0035999; P:tetrahydrofolate interconversion; IEA:UniProtKB-UniPathway.
DR GO; GO:0046653; P:tetrahydrofolate metabolic process; IBA:GO_Central.
DR Gene3D; 3.40.640.10; Type I PLP-dependent aspartate aminotransferase-like (Major domain); 1.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR InterPro; IPR001085; Ser_HO-MeTrfase.
DR InterPro; IPR039429; SHMT-like_dom.
DR PANTHER; PTHR11680; SERINE HYDROXYMETHYLTRANSFERASE; 1.
DR PANTHER; PTHR11680:SF64; SERINE HYDROXYMETHYLTRANSFERASE, MITOCHONDRIAL; 1.
DR Pfam; PF00464; SHMT; 1.
DR SUPFAM; SSF53383; PLP-dependent transferases; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000011115}.
FT DOMAIN 416..522
FT /note="Serine hydroxymethyltransferase-like"
FT /evidence="ECO:0000259|Pfam:PF00464"
SQ SEQUENCE 651 AA; 73972 MW; A29AE859666943C6 CRC64;
MLANQAKEEI FHSILDETKE EADFPIPQHF NEPLIYDNNQ AHKVFDEFSV ASKDVILESH
KMLTINTDTI EESNYVTGVG NEGKNEEEEL FTIGNKIRQL VPAIVGIPSL WFDSPFSSFG
DFAMFSMLHK LGIARCSEEL CGMLSTCRYD QLTNRGITDH FSRLGQVSLV LTLHLFPHDQ
SRLAFPFDPD SCLLTMFLRV TRNSVFCLAS DNLGHNKFIM STLWYSFNWV GKGQEQCLPG
FLLSKLRELS KAEKIQGLLE AFAAQYSERF HNLLVNKDDV LLFAMFGVHV SKPSSSYLVF
DPGLYLDDDS VVFGVMEMKD VWRTCIKRFL LVAKITVAYS FVCNIFTKAL YSLSLNNNSG
WSLTLQPFSY SSPSTDASEQ FNSSLEFHLA LHHASLVHHI WIKQWNALFE HIHPYCHDYQ
TNMEKFFNVS LFFNAISWKV DVSTGYIDCT QLENYATLFR PKFIVTNTSA YARCYDYARL
RKVRSKQKVF LLANMAHIIV LVASWVVCSP FEYAIDVICA IQIKGAKAYT TIVFGKSLFA
LEHFGNEHSI CIVVSGVVVV ARIIQDHILF FVNIAQFLFA TTCGVHATNI VLDSNLEDKV
LIDDGSIVMN QPRSNVNTYT DATQLVIGPK RSNKIRRSSQ RLVWDLGPIN N
//