ID M1AVN7_SOLTU Unreviewed; 550 AA.
AC M1AVN7;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400031446};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400031446, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400031446}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400031446};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR AlphaFoldDB; M1AVN7; -.
DR STRING; 4113.M1AVN7; -.
DR PaxDb; 4113-PGSC0003DMT400031446; -.
DR EnsemblPlants; PGSC0003DMT400031446; PGSC0003DMT400031446; PGSC0003DMG400012059.
DR Gramene; PGSC0003DMT400031446; PGSC0003DMT400031446; PGSC0003DMG400012059.
DR eggNOG; KOG4197; Eukaryota.
DR InParanoid; M1AVN7; -.
DR OMA; KRVGINW; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR ExpressionAtlas; M1AVN7; baseline.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 10.
DR PANTHER; PTHR45613:SF476; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR PANTHER; PTHR45613; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF12854; PPR_1; 4.
DR Pfam; PF13041; PPR_2; 1.
DR PROSITE; PS51375; PPR; 10.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 97..131
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 132..162
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 163..197
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 198..232
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 233..267
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 268..302
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 303..337
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 373..407
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 408..442
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 478..512
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 550 AA; 61431 MW; 4E91D67E6B95BA8F CRC64;
MLCNFRRFDC VHHLLDEMPS SIGSTPDEDI FVTIVRGLGR TGMIKQVIKI PELVSKFEKK
PTLKLYNSIL DVLVKEDIDI AREFYRIKMM GNGIHGDDYT YGILMKGLCL TNRIGDGFKL
LQVMKTRGIT PNTVIYNTLI HALCKNGKVG RARSLMRDLV EPSDVTFNIL ISAYCGEGSL
VQALVMLEKS FNKGYIPDVI TVTKVVGLLC NNGRVSEAVE LLERVEERGG IVDVVAYNTL
INGFCRLGKV KVGCRLLKEM ELKGCMPNAD TYNGLISGLC DSKMLDLALE MFNEMKRVGI
NWNFVTYDTL IHGLCSGGRV ENGLKILEVM KDDKGVSAFH ISPYNGVIYG FYNENCLEEA
LAFLRKMENL FPRAVDRSVR IIGFCENGNI GEARRVYDQM VEEGVMPSAL VYANLVSGYC
SKGCIKGAFE LMNEMIGRGY LPVASTLNDV IILLCKQGKV GKASKLMEDI KGRGCLLDSG
SYGPFIDVFC SRGDFHKAYM FFLQMVEKGI VPDYHLWNTL LVCLCQQTSW IEGNNKTCRL
TSQLQAIIQT
//