ID M1AX89_SOLTU Unreviewed; 445 AA.
AC M1AX89;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 24-JAN-2024, entry version 61.
DE SubName: Full=Alpha-expansin 12 {ECO:0000313|EnsemblPlants:PGSC0003DMT400032334};
GN Name=102587708 {ECO:0000313|EnsemblPlants:PGSC0003DMT400032334};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400032334, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400032334}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400032334};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004170};
CC Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004170}. Secreted,
CC cell wall {ECO:0000256|ARBA:ARBA00004191}.
CC -!- SIMILARITY: Belongs to the expansin family. Expansin A subfamily.
CC {ECO:0000256|ARBA:ARBA00005392}.
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DR AlphaFoldDB; M1AX89; -.
DR STRING; 4113.M1AX89; -.
DR PaxDb; 4113-PGSC0003DMT400032334; -.
DR EnsemblPlants; PGSC0003DMT400032334; PGSC0003DMT400032334; PGSC0003DMG400012421.
DR Gramene; PGSC0003DMT400032334; PGSC0003DMT400032334; PGSC0003DMG400012421.
DR eggNOG; KOG0823; Eukaryota.
DR HOGENOM; CLU_615954_0_0_1; -.
DR InParanoid; M1AX89; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR ExpressionAtlas; M1AX89; baseline.
DR GO; GO:0005576; C:extracellular region; IEA:InterPro.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0009653; P:anatomical structure morphogenesis; IEA:UniProt.
DR GO; GO:0009664; P:plant-type cell wall organization; IEA:InterPro.
DR CDD; cd22274; DPBB_EXPA_N; 1.
DR CDD; cd16745; RING-HC_AtRMA-like; 1.
DR Gene3D; 2.60.40.760; Expansin, cellulose-binding-like domain; 1.
DR Gene3D; 2.40.40.10; RlpA-like domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR007118; Expan_Lol_pI.
DR InterPro; IPR002963; Expansin.
DR InterPro; IPR007112; Expansin/allergen_DPBB_dom.
DR InterPro; IPR007117; Expansin_CBD.
DR InterPro; IPR036749; Expansin_CBD_sf.
DR InterPro; IPR009009; RlpA-like_DPBB.
DR InterPro; IPR036908; RlpA-like_sf.
DR InterPro; IPR018957; Znf_C3HC4_RING-type.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR31867:SF124; EXPANSIN-A12; 1.
DR PANTHER; PTHR31867; EXPANSIN-A15; 1.
DR Pfam; PF03330; DPBB_1; 1.
DR Pfam; PF01357; Expansin_C; 1.
DR Pfam; PF00097; zf-C3HC4; 1.
DR PRINTS; PR01226; EXPANSIN.
DR PRINTS; PR01225; EXPANSNFAMLY.
DR SMART; SM00837; DPBB_1; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF50685; Barwin-like endoglucanases; 1.
DR SUPFAM; SSF49590; PHL pollen allergen; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50843; EXPANSIN_CBD; 1.
DR PROSITE; PS50842; EXPANSIN_EG45; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 3: Inferred from homology;
KW Cell wall {ECO:0000256|ARBA:ARBA00022512};
KW Cell wall biogenesis/degradation {ECO:0000256|ARBA:ARBA00023316};
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW Secreted {ECO:0000256|ARBA:ARBA00022512};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 36..83
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 239..350
FT /note="Expansin-like EG45"
FT /evidence="ECO:0000259|PROSITE:PS50842"
FT DOMAIN 360..440
FT /note="Expansin-like CBD"
FT /evidence="ECO:0000259|PROSITE:PS50843"
SQ SEQUENCE 445 AA; 48543 MW; 97203CF4F1001DA7 CRC64;
MFSFVSEEDV SLKKGSAVPV PVPTSSSDNI TGGYDCNICL DSAHDPVVTL CGHLYCWPCI
YKWLQVDSST PGSEEKCKCP VCKAHISNSS LVPLYGRGTS STESESKKSQ RDVVVPRRPQ
AIEISTLVNS LSPSSHVSQQ LHHRRSVPSA FGSYAALAPS SFGGTPTISL SSPTVGVFGE
MFLGRMFGNS DTSLFAYPHP NTSTIPGSGG FRMRQINAQN WLNGRATFYG VNQDPSTFGG
ACGYDNPYHA GFGVNTAALS SALFRNGQAC GACYTVRCNR QLDRKWCLPH GAVTVTATNF
CPPNNHGGWC DAPRQHFDMS MPAFLRIARQ GNEGVVPILY TRVACKRSGG VRFTLKGQSN
FNMVMISNVG GSGDIKSVSI RGSRTKTWLP MYRNWGVNWQ SRNDLRSQTL SFRVTLVDGK
TMEFINVVPS AWKFGQTFAS RRQFN
//
