ID M1BDS4_SOLTU Unreviewed; 498 AA.
AC M1BDS4;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE SubName: Full=Homeobox protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400042908};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400042908, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400042908}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400042908};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
CC -!- SIMILARITY: Belongs to the HD-ZIP homeobox family. Class IV subfamily.
CC {ECO:0000256|ARBA:ARBA00006789}.
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DR AlphaFoldDB; M1BDS4; -.
DR SMR; M1BDS4; -.
DR PaxDb; 4113-PGSC0003DMT400042908; -.
DR EnsemblPlants; PGSC0003DMT400042908; PGSC0003DMT400042908; PGSC0003DMG400016639.
DR Gramene; PGSC0003DMT400042908; PGSC0003DMT400042908; PGSC0003DMG400016639.
DR eggNOG; ENOG502QUAY; Eukaryota.
DR HOGENOM; CLU_015002_0_0_1; -.
DR InParanoid; M1BDS4; -.
DR OMA; TRASCIV; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR GO; GO:0008289; F:lipid binding; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR CDD; cd08875; START_ArGLABRA2_like; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR042160; GLABRA2/ANL2/PDF2/ATML1-like.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR002913; START_lipid-bd_dom.
DR PANTHER; PTHR45654:SF53; HOMEOBOX DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR45654; HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR Pfam; PF01852; START; 1.
DR SMART; SM00389; HOX; 1.
DR SMART; SM00234; START; 1.
DR SUPFAM; SSF55961; Bet v1-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
DR PROSITE; PS50848; START; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000011115}.
FT DOMAIN 49..109
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DOMAIN 181..371
FT /note="START"
FT /evidence="ECO:0000259|PROSITE:PS50848"
FT DNA_BIND 51..110
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
SQ SEQUENCE 498 AA; 55730 MW; 8EEB77E3D393C538 CRC64;
MEGHSDMNER RESLINVVIG GSGEEEIERS SIGDNIIGGA SVDERCESSS KRKKPIRHNS
DQIQALGSFF KKNSLPNKKV QLELATKLSM DINQVQNWFQ NKRTQMKSQL KLYENKTLKQ
ENDKFRIEHI VMKEALENSI RYNCKEKIDE NQRKIEHDQL EDEVKRLTAQ AYKLSLFNKD
VVHDKMVLLN LAMDALNELF RLYENDKPLW VSSLDGGGET LNIEEYARLF TPLIGTKPEH
FTTEATKASG IVADTSLALV NTLMDKRQWV EMFPCIVGKT YTTDVISTGI GGNKSGSLLL
IKTELQIISD LVYVREVQFL RFCKKHAEGV WAIVDVSVDT IQEGSQQSEI ENCRRLPSGC
ILQDMPNGYC QGDDSGANRV ILQDTCMDAT GSLLVYATID SQEINTVMKG GDSSCVTLFS
NGITIVPDYF QDFSTTNNYN VISGEMNNGF GGGSLVTISF QMVGNIFPAT TLSMELVKEA
NALISHTIHK IKSALKCK
//
