ID M1BHU5_SOLTU Unreviewed; 438 AA.
AC M1BHU5;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400045546, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400045546}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400045546};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
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DR AlphaFoldDB; M1BHU5; -.
DR STRING; 4113.M1BHU5; -.
DR PaxDb; 4113-PGSC0003DMT400045546; -.
DR EnsemblPlants; PGSC0003DMT400045546; PGSC0003DMT400045546; PGSC0003DMG400017664.
DR Gramene; PGSC0003DMT400045546; PGSC0003DMT400045546; PGSC0003DMG400017664.
DR Gramene; RHC11H1G2648.2.1; RHC11H1G2648.2.1.cds.1; RHC11H1G2648.2.
DR eggNOG; ENOG502QPYA; Eukaryota.
DR HOGENOM; CLU_038986_0_0_1; -.
DR InParanoid; M1BHU5; -.
DR OMA; WNERITG; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR CDD; cd02655; RNAP_beta'_C; 1.
DR Gene3D; 1.10.150.390; -; 1.
DR Gene3D; 1.10.1790.20; -; 1.
DR InterPro; IPR007081; RNA_pol_Rpb1_5.
DR PANTHER; PTHR48355; DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA; 1.
DR PANTHER; PTHR48355:SF2; DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA; 1.
DR Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 242..329
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF04998"
SQ SEQUENCE 438 AA; 49481 MW; 183CFF63F8343CC5 CRC64;
MEPFKDVKYH SVIKESIKKD PLIPIRNSLG PLGTCLPIEN FYSSYHLITH NQILVTKYLQ
LDNLKQTFQV IKLKYYLMDE NGKIFNPDPC RNIILNPFNL NWSFLHHNYC AETSKIISLG
QFICENVCIA KNGPPLKSGQ VILVQVDSIV IRSAKPYLAT PGATVHGHYG ETLYEGDTLV
TFIYEKSRSG DITQGLPKVE QVLEVRSIDS ISMNLEKRVE SWNKCIPRIL GIPWGFLIGA
ELTIAQSRIS LVNKIQQVYR SQGVQIHNRH IEIIVRQITS KVLISEDGMS NVFSPGELIG
LLRAERMGRA LEEAICYRVV LLGITRASLN TQSFISEASF QETARVLAKA ALRGRIDWLK
GLKENVVLGG VIPVGTGFKG LVHPSKQHNN IPLETKKTNL FEGEMRDILF HHRKLFDSCL
SKKFHDIPEQ SFIGFNDS
//
