ID M1BLY4_SOLTU Unreviewed; 160 AA.
AC M1BLY4;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE SubName: Full=High mobility group protein 2 HMG2 {ECO:0000313|EnsemblPlants:PGSC0003DMT400048091};
GN Name=102604023 {ECO:0000313|EnsemblPlants:PGSC0003DMT400048091};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400048091, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400048091}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400048091};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR AlphaFoldDB; M1BLY4; -.
DR STRING; 4113.M1BLY4; -.
DR PaxDb; 4113-PGSC0003DMT400048091; -.
DR EnsemblPlants; PGSC0003DMT400048091; PGSC0003DMT400048091; PGSC0003DMG400018685.
DR Gramene; PGSC0003DMT400048091; PGSC0003DMT400048091; PGSC0003DMG400018685.
DR eggNOG; KOG0381; Eukaryota.
DR InParanoid; M1BLY4; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR ExpressionAtlas; M1BLY4; baseline and differential.
DR GO; GO:0000785; C:chromatin; IEA:UniProt.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003682; F:chromatin binding; IEA:UniProt.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0030527; F:structural constituent of chromatin; IEA:UniProt.
DR GO; GO:0006325; P:chromatin organization; IEA:UniProt.
DR CDD; cd22005; HMG-box_AtHMGB1-like; 1.
DR Gene3D; 1.10.30.10; High mobility group box domain; 1.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR InterPro; IPR031061; HMGB_plant.
DR PANTHER; PTHR46261; HIGH MOBILITY GROUP B PROTEIN 4-RELATED; 1.
DR PANTHER; PTHR46261:SF34; HMG1_2-LIKE PROTEIN; 1.
DR Pfam; PF00505; HMG_box; 1.
DR SMART; SM00398; HMG; 1.
DR SUPFAM; SSF47095; HMG-box; 1.
DR PROSITE; PS50118; HMG_BOX_2; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Reference proteome {ECO:0000313|Proteomes:UP000011115}.
FT DOMAIN 44..113
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 44..113
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 1..47
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 95..150
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 14..42
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 160 AA; 18440 MW; 7C13882B6AEA7889 CRC64;
MDAHPFFIMK GGKSKGKADN KLGVKKSAAQ TKKEKNAAKD PNKPKRPASA FFVFMEDFRK
QYKEKHPGNK SVAAVGKAGG DKWKHLTDAE KAPYIAKAEK RKAEYEKLMD AYNRKQARSN
CELLVRLRKM RNLTSQSLRL MRKMEAMRKK RMMTEVLMEE
//