GenomeNet

Database: UniProt
Entry: M1BLY4_SOLTU
LinkDB: M1BLY4_SOLTU
Original site: M1BLY4_SOLTU 
ID   M1BLY4_SOLTU            Unreviewed;       160 AA.
AC   M1BLY4;
DT   03-APR-2013, integrated into UniProtKB/TrEMBL.
DT   03-APR-2013, sequence version 1.
DT   27-MAR-2024, entry version 47.
DE   SubName: Full=High mobility group protein 2 HMG2 {ECO:0000313|EnsemblPlants:PGSC0003DMT400048091};
GN   Name=102604023 {ECO:0000313|EnsemblPlants:PGSC0003DMT400048091};
OS   Solanum tuberosum (Potato).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX   NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400048091, ECO:0000313|Proteomes:UP000011115};
RN   [1] {ECO:0000313|Proteomes:UP000011115}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX   PubMed=21743474; DOI=10.1038/nature10158;
RG   The Potato Genome Sequencing Consortium;
RT   "Genome sequence and analysis of the tuber crop potato.";
RL   Nature 475:189-195(2011).
RN   [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400048091}
RP   IDENTIFICATION.
RC   STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400048091};
RG   EnsemblPlants;
RL   Submitted (JUN-2015) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   AlphaFoldDB; M1BLY4; -.
DR   STRING; 4113.M1BLY4; -.
DR   PaxDb; 4113-PGSC0003DMT400048091; -.
DR   EnsemblPlants; PGSC0003DMT400048091; PGSC0003DMT400048091; PGSC0003DMG400018685.
DR   Gramene; PGSC0003DMT400048091; PGSC0003DMT400048091; PGSC0003DMG400018685.
DR   eggNOG; KOG0381; Eukaryota.
DR   InParanoid; M1BLY4; -.
DR   Proteomes; UP000011115; Unassembled WGS sequence.
DR   ExpressionAtlas; M1BLY4; baseline and differential.
DR   GO; GO:0000785; C:chromatin; IEA:UniProt.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003682; F:chromatin binding; IEA:UniProt.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0030527; F:structural constituent of chromatin; IEA:UniProt.
DR   GO; GO:0006325; P:chromatin organization; IEA:UniProt.
DR   CDD; cd22005; HMG-box_AtHMGB1-like; 1.
DR   Gene3D; 1.10.30.10; High mobility group box domain; 1.
DR   InterPro; IPR009071; HMG_box_dom.
DR   InterPro; IPR036910; HMG_box_dom_sf.
DR   InterPro; IPR031061; HMGB_plant.
DR   PANTHER; PTHR46261; HIGH MOBILITY GROUP B PROTEIN 4-RELATED; 1.
DR   PANTHER; PTHR46261:SF34; HMG1_2-LIKE PROTEIN; 1.
DR   Pfam; PF00505; HMG_box; 1.
DR   SMART; SM00398; HMG; 1.
DR   SUPFAM; SSF47095; HMG-box; 1.
DR   PROSITE; PS50118; HMG_BOX_2; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00267};
KW   Nucleus {ECO:0000256|PROSITE-ProRule:PRU00267};
KW   Reference proteome {ECO:0000313|Proteomes:UP000011115}.
FT   DOMAIN          44..113
FT                   /note="HMG box"
FT                   /evidence="ECO:0000259|PROSITE:PS50118"
FT   DNA_BIND        44..113
FT                   /note="HMG box"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT   REGION          1..47
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          95..150
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        14..42
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   160 AA;  18440 MW;  7C13882B6AEA7889 CRC64;
     MDAHPFFIMK GGKSKGKADN KLGVKKSAAQ TKKEKNAAKD PNKPKRPASA FFVFMEDFRK
     QYKEKHPGNK SVAAVGKAGG DKWKHLTDAE KAPYIAKAEK RKAEYEKLMD AYNRKQARSN
     CELLVRLRKM RNLTSQSLRL MRKMEAMRKK RMMTEVLMEE
//
DBGET integrated database retrieval system