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Database: UniProt
Entry: M1BN02_SOLTU
LinkDB: M1BN02_SOLTU
Original site: M1BN02_SOLTU 
ID   M1BN02_SOLTU            Unreviewed;       387 AA.
AC   M1BN02;
DT   03-APR-2013, integrated into UniProtKB/TrEMBL.
DT   03-APR-2013, sequence version 1.
DT   24-JAN-2024, entry version 59.
DE   SubName: Full=RNA binding protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400048896};
GN   Name=102585899 {ECO:0000313|EnsemblPlants:PGSC0003DMT400048896};
OS   Solanum tuberosum (Potato).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX   NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400048896, ECO:0000313|Proteomes:UP000011115};
RN   [1] {ECO:0000313|Proteomes:UP000011115}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX   PubMed=21743474; DOI=10.1038/nature10158;
RG   The Potato Genome Sequencing Consortium;
RT   "Genome sequence and analysis of the tuber crop potato.";
RL   Nature 475:189-195(2011).
RN   [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400048896}
RP   IDENTIFICATION.
RC   STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400048896};
RG   EnsemblPlants;
RL   Submitted (JUN-2015) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR   RefSeq; XP_006343487.1; XM_006343425.2.
DR   AlphaFoldDB; M1BN02; -.
DR   STRING; 4113.M1BN02; -.
DR   PaxDb; 4113-PGSC0003DMT400048896; -.
DR   EnsemblPlants; PGSC0003DMT400048896; PGSC0003DMT400048896; PGSC0003DMG400018999.
DR   GeneID; 102585899; -.
DR   Gramene; PGSC0003DMT400048896; PGSC0003DMT400048896; PGSC0003DMG400018999.
DR   Gramene; RHC11H1G1463.2.1; RHC11H1G1463.2.1; RHC11H1G1463.2.
DR   eggNOG; KOG1995; Eukaryota.
DR   HOGENOM; CLU_025609_0_0_1; -.
DR   InParanoid; M1BN02; -.
DR   OMA; ACPMCAN; -.
DR   OrthoDB; 162112at2759; -.
DR   Proteomes; UP000011115; Unassembled WGS sequence.
DR   ExpressionAtlas; M1BN02; baseline and differential.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   CDD; cd12534; RRM_SARFH; 1.
DR   Gene3D; 3.30.70.330; -; 1.
DR   Gene3D; 4.10.1060.10; Zinc finger, RanBP2-type; 2.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR035979; RBD_domain_sf.
DR   InterPro; IPR000504; RRM_dom.
DR   InterPro; IPR001876; Znf_RanBP2.
DR   InterPro; IPR036443; Znf_RanBP2_sf.
DR   PANTHER; PTHR12999:SF17; ZINC FINGER RAN-BINDING DOMAIN-CONTAINING PROTEIN 2; 1.
DR   PANTHER; PTHR12999; ZINC FINGER RAN-BINDING DOMAIN-CONTAINING PROTEIN 2 ZRANB2-RELATED; 1.
DR   Pfam; PF00076; RRM_1; 1.
DR   Pfam; PF00641; zf-RanBP; 1.
DR   SMART; SM00360; RRM; 1.
DR   SMART; SM00547; ZnF_RBZ; 2.
DR   SUPFAM; SSF90209; Ran binding protein zinc finger-like; 2.
DR   SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR   PROSITE; PS50102; RRM; 1.
DR   PROSITE; PS01358; ZF_RANBP2_1; 2.
DR   PROSITE; PS50199; ZF_RANBP2_2; 2.
PE   4: Predicted;
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00322}.
FT   DOMAIN          13..99
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   DOMAIN          152..183
FT                   /note="RanBP2-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50199"
FT   DOMAIN          219..248
FT                   /note="RanBP2-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50199"
FT   REGION          183..215
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          249..387
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        260..303
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        323..387
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   387 AA;  42783 MW;  A3C2CC93F4D50FFF CRC64;
     MASYSGKGSP LNGSVYVCNL PLGTDEDMLA EYFGTIGVLK KDKRSGRPKI WLYRDKVTNE
     PKGDATVTYE DPHAALAAVE WFNNKDFHGS MIGVFIAESK NKDEASYVSV NQISEPNLDS
     GLAVLDEVSN DIDGGGGSGR GRGDASAKAW QQDGDWLCPN TSCTNVNFAF RGVCNRCGTA
     RPAGAGGGGG GAAGRGRGRG SQDPGAPGRA VGGPPGLFGP NDWACPMCAN INWAKRNKCN
     ICNTNKPGHN EGGVRGGRAG GYKELDEEEI EETRRRRREA EEDDGEMYDE FGNLKKKFRA
     KTQRAEAAQS LPPGVGRAGW EAEELGVAER DRKERSRERS RDYDDRERAR HRSRSRERDR
     GRDRDRSYDY DRDREYGRDR ERNRYRH
//
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