ID M1C3L2_SOLTU Unreviewed; 462 AA.
AC M1C3L2;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE SubName: Full=Pre-mRNA-splicing factor cwc-22 {ECO:0000313|EnsemblPlants:PGSC0003DMT400058968};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400058968, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400058968}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400058968};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the CWC22 family.
CC {ECO:0000256|ARBA:ARBA00006856}.
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DR AlphaFoldDB; M1C3L2; -.
DR STRING; 4113.M1C3L2; -.
DR PaxDb; 4113-PGSC0003DMT400058968; -.
DR EnsemblPlants; PGSC0003DMT400058968; PGSC0003DMT400058968; PGSC0003DMG400022902.
DR Gramene; PGSC0003DMT400058968; PGSC0003DMT400058968; PGSC0003DMG400022902.
DR eggNOG; KOG2140; Eukaryota.
DR HOGENOM; CLU_006308_3_0_1; -.
DR InParanoid; M1C3L2; -.
DR OMA; PKNMRFA; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR GO; GO:0071013; C:catalytic step 2 spliceosome; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IBA:GO_Central.
DR Gene3D; 1.25.40.180; -; 1.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR003891; Initiation_fac_eIF4g_MI.
DR InterPro; IPR003890; MIF4G-like_typ-3.
DR PANTHER; PTHR18034; CELL CYCLE CONTROL PROTEIN CWF22-RELATED; 1.
DR PANTHER; PTHR18034:SF8; MI DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF02847; MA3; 1.
DR Pfam; PF02854; MIF4G; 1.
DR SMART; SM00544; MA3; 1.
DR SMART; SM00543; MIF4G; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR PROSITE; PS51366; MI; 1.
PE 3: Inferred from homology;
KW Initiation factor {ECO:0000256|ARBA:ARBA00022540};
KW Protein biosynthesis {ECO:0000256|ARBA:ARBA00022917};
KW Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW Translation regulation {ECO:0000256|ARBA:ARBA00022845}.
FT DOMAIN 238..354
FT /note="MI"
FT /evidence="ECO:0000259|PROSITE:PS51366"
FT REGION 202..232
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 443..462
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 208..230
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 446..462
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 462 AA; 53473 MW; 88C95FA4537640CF CRC64;
MKSQLNSAIF TDVFAALIAV VNTKFPQIGE LLCKRIILQL RRAYNNNNKP QMLASVKFIG
HLVNQQVVHE LVALELVTLL LEKPTDDSVD VAVGFVKECG SMLQDLCPLG LHAIFERFRG
ILHEGEIDKR VQFLIEDLFA LRKHKFQPAV PPELDLVEEE DRLTHEISLG DKVDEQIELD
VFKPDPNFVE NENKYEQLQK RILGGGDQDE DSEDDDESKD EDEQQMEIED ETETNLINLR
RTIYLTIMSS AEFEEAGHKL LKIRLEPGQE MELCIMLLEC CSQEKTSLHY YALLGQRLCM
INKVHQKNFE KSFMQQYSMI HQLETNKLRN VAKFFAHLLG TDALPWHVLA YLRLTEEDTT
SSSRIFIKNL FQELSGHLGI RMLNERLSDP SMQELFESIF PKDSPKNMRF AINFFTSIGL
GGITENLRDY LKNMPRLILQ QDKRVSRSSE SVDDRPRKRR RS
//
