ID M1C6J2_SOLTU Unreviewed; 415 AA.
AC M1C6J2;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 24-JAN-2024, entry version 45.
DE SubName: Full=Ubiquitin-protein ligase {ECO:0000313|EnsemblPlants:PGSC0003DMT400060848};
GN Name=102597556 {ECO:0000313|EnsemblPlants:PGSC0003DMT400060848};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400060848, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400060848}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400060848};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
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DR RefSeq; XP_006351347.1; XM_006351285.2.
DR AlphaFoldDB; M1C6J2; -.
DR PaxDb; 4113-PGSC0003DMT400060848; -.
DR EnsemblPlants; PGSC0003DMT400060848; PGSC0003DMT400060848; PGSC0003DMG400023670.
DR GeneID; 102597556; -.
DR Gramene; PGSC0003DMT400060848; PGSC0003DMT400060848; PGSC0003DMG400023670.
DR KEGG; sot:102597556; -.
DR eggNOG; ENOG502QW0D; Eukaryota.
DR HOGENOM; CLU_050147_0_0_1; -.
DR InParanoid; M1C6J2; -.
DR OMA; GCPMSKE; -.
DR OrthoDB; 2969221at2759; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR GO; GO:0005829; C:cytosol; IEA:EnsemblPlants.
DR GO; GO:0005634; C:nucleus; IEA:EnsemblPlants.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR15315; RING FINGER PROTEIN 41, 151; 1.
DR PANTHER; PTHR15315:SF89; RING-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF13920; zf-C3HC4_3; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 126..160
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 1..107
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 16..31
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 55..72
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 415 AA; 45825 MW; EA27BE9CB94125F6 CRC64;
MIPVCPFAGA SRPDDATLNK PHDENKQQAQ PKKESGEAAT VSPKCPFGYD STLKKPCDDQ
NKQQDGQESK PKQDSGESAT VSPKCPFGYD GQESKPKQDS GESATMSPKC PFGYDSQAFK
LGPFSCMICQ ALLYDSSRCV PCSHVFCKAC LSRFKDCPLC GADIEKIEAD MNLQNVVDRF
IEGHARIKRS NNEQEDIVEK KTVIYEDASL ERGAFLVQQA MRAFRANNID SAKSRFTMCA
DDIREQLQRM GNTSELCSQL GAVLGMLGDC SRATGDAVSA VAYFEESVNF LLKVPKDDVE
ITHTLSVSLN KIGDLKYYAG DLQAARSHYF RALDVRRNAI KQPSVPSQIV DVAISLAKVA
DIDRNLGDED TAVEGFQKGI KLLQSLELKP EEVSLEQRRL SVLEFLNSQL EKKET
//
