ID M1C9L6_SOLTU Unreviewed; 283 AA.
AC M1C9L6;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE SubName: Full=DNA binding protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400062842};
GN Name=102600330 {ECO:0000313|EnsemblPlants:PGSC0003DMT400062842};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400062842, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400062842}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400062842};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR AlphaFoldDB; M1C9L6; -.
DR SMR; M1C9L6; -.
DR EnsemblPlants; PGSC0003DMT400062842; PGSC0003DMT400062842; PGSC0003DMG401024463.
DR Gramene; PGSC0003DMT400062842; PGSC0003DMT400062842; PGSC0003DMG401024463.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR ExpressionAtlas; M1C9L6; baseline.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 4.10.280.10; Helix-loop-helix DNA-binding domain; 1.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR024097; bHLH_ZIP_TF.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR PANTHER; PTHR12565:SF411; BHLH DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR12565; STEROL REGULATORY ELEMENT-BINDING PROTEIN; 1.
DR Pfam; PF00010; HLH; 1.
DR SMART; SM00353; HLH; 1.
DR SUPFAM; SSF47459; HLH, helix-loop-helix DNA-binding domain; 1.
DR PROSITE; PS50888; BHLH; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 162..212
FT /note="BHLH"
FT /evidence="ECO:0000259|PROSITE:PS50888"
FT REGION 65..95
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 122..158
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 122..136
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 137..152
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 283 AA; 30109 MW; A0981EFA1D98325C CRC64;
MDPPIINEGS FSAANPSSYT LAEIWPFAAA ANGGGNGELG GGGLGLRMSS FTGLLEAAAN
SINESTLTEQ SGRSGGGGGA GGGGGGGNVG VRKRDMNSED DFSKFVSTSD ANDLDGSVAK
RLKASQSKEE NGASKVEAES SSHTANKGTE QSSKPEPPKD YIHWLSRILI YQARREKISE
RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS MKLEAVNSRM NHPIETYPSK
DLAPSAFDTT GMIFGTQAPR EYAQGAQSEW LHMQVGNSFD RAT
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