ID M1CAW1_SOLTU Unreviewed; 938 AA.
AC M1CAW1;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 22-FEB-2023, entry version 44.
DE SubName: Full=Splicing factor, arginine/serine-rich 2,rnap interacting protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400063612};
GN Name=102592881 {ECO:0000313|EnsemblPlants:PGSC0003DMT400063612};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400063612, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400063612}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400063612};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
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DR AlphaFoldDB; M1CAW1; -.
DR EnsemblPlants; PGSC0003DMT400063612; PGSC0003DMT400063612; PGSC0003DMG400024731.
DR Gramene; PGSC0003DMT400063612; PGSC0003DMT400063612; PGSC0003DMG400024731.
DR HOGENOM; CLU_009428_1_0_1; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR ExpressionAtlas; M1CAW1; baseline.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd16574; RING-HC_Topors; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR47177; F18C1.6 PROTEIN; 1.
DR PANTHER; PTHR47177:SF3; F18C1.6 PROTEIN; 1.
DR Pfam; PF00628; PHD; 1.
DR Pfam; PF13639; zf-RING_2; 1.
DR SMART; SM00249; PHD; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 566..608
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 656..705
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT REGION 1..506
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 854..874
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..23
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 29..63
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 74..95
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 103..121
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 222..243
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 249..264
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 265..284
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 285..304
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 383..402
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 413..447
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 448..469
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 938 AA; 107016 MW; DA812B0D1B32B8F6 CRC64;
MAREGKAGRK TSDRRKAGST YRASDQSDED YTVDDDEEFD ESEDGYSSFV GDDSEESLGE
YEDEEEEFKT RKVKRVARSR APSRKEKGTV KSRKRKRVSY REDDDDDDED DEEFTPDCLD
EEEEFPVTKG TNNSSKRRLR KGTVKDEDDE EFTPDCLDEE EEFPVTKGTN NSSKRRLRKG
TVKDEDDEEF TPDCLDEEEE FPVMKGTNNS SKRRLCEGTV KDEDDEEFTP DCLDEEEEEF
PVTEGMDNSS KRQLRKATFK DEDEEFTPDC LDNEDDEEEE SPVMEGTDNS NKRRLRRGTV
KDEEDEELNP DGLHEEEDFP VMKGMKNSSR LRRRKATAKD DDEDDEEFTP ISLDEEEDIP
ITKRMKNSSK PRLCKGYTKD DDDDEEFTPD GLDEEEEEEF PEMEGIKYSA KPRSRKGTAR
VQKRNRNHKK LKKITRKKSL KRRRLRRKAR SENDEEFIDV DPTMKEKNKK NAGQKRKRKR
LTVDSDSDFV ASSGSSEREF TISEEEREQV REANNFCRSL VTTWRGSASL KKSPIEEAPR
LQRKHPARKA KEKMEELKIE AGKQICGICL SEEGKRTVRG TLNCCSHYFC FACIMEWSKV
ESRCPLCKQR FVTISKPARS DTGFDLRTVV IHVPERDQVY QPSEEELRGY LDPYENVLCT
ECQQGGDDAL MLLCDLCDSP AHTYCVGLGH EVPEGNWYCE SCRPTALASL NPQNLNPMPD
NRTSGSFSVG SPPVANVRET FDLNEMYVPD TPLTEESGDF QSPRDGQVSS LASGIGAFTV
SDRRRIQRQI HQLLNNRRRQ LGNITGTLGA VSGNSLFGSQ IARSRELATQ PAIAQRAVPH
NSFFRGRQLE SDAHLSQNPN LVPERSSNLS GQLNLNGAST SSQSFFGEFL ESELQGTDAS
FNFNLAHQQL HPCSSRSNVG PDASTSPCQF REVSSLIR
//
