ID M1CQC3_SOLTU Unreviewed; 439 AA.
AC M1CQC3;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 08-NOV-2023, entry version 39.
DE RecName: Full=TFIIS N-terminal domain-containing protein {ECO:0000259|PROSITE:PS51319};
GN Name=102586751 {ECO:0000313|EnsemblPlants:PGSC0003DMT400072461};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400072461, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400072461}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400072461};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00649}.
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DR AlphaFoldDB; M1CQC3; -.
DR EnsemblPlants; PGSC0003DMT400072461; PGSC0003DMT400072461; PGSC0003DMG400028192.
DR Gramene; PGSC0003DMT400072461; PGSC0003DMT400072461; PGSC0003DMG400028192.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR ExpressionAtlas; M1CQC3; baseline and differential.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR CDD; cd00183; TFIIS_I; 1.
DR Gene3D; 1.20.930.10; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR InterPro; IPR044805; MD26A/B-like.
DR InterPro; IPR003617; TFIIS/CRSP70_N_sub.
DR InterPro; IPR035441; TFIIS/LEDGF_dom_sf.
DR InterPro; IPR017923; TFIIS_N.
DR PANTHER; PTHR46554; MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED; 1.
DR PANTHER; PTHR46554:SF2; TFIIS N-TERMINAL DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF08711; Med26; 1.
DR SMART; SM00509; TFS2N; 1.
DR SUPFAM; SSF47676; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR PROSITE; PS51319; TFIIS_N; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00649}; Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 415..435
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 134..208
FT /note="TFIIS N-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51319"
FT REGION 219..238
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 260..347
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 272..310
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 439 AA; 49474 MW; CAA5608FAB61B365 CRC64;
MAKSSGTLDK WRDYFRTANS DIFDIIEYAV MVAAVDCPKE FKLRRDRIAE MLFTCKVTMC
FGCEKVDLAV PIASNDDEGK IKSKDEFGVS KESKANSRID HHDVEMNVNQ VSNYSYGEAE
ALTEEMEEET QIFGEVMRIK DVIDNNQAES AELFECLRRL QLMALSVETL KATEIGKSVN
SLRKHNSKDV RHLARTLIED WKVLVEEWVN ATAAFAGNES TPESMKASVV DQDEEGLPSP
PLDDLAFFSA QTTSIELSQF FDGMDDDGNP RNSGGFNANR GNGRKPSLGN QNIPFQKKQS
ADCFNASPKE NKGEQQKKQE AVIKKQTTVV KPTKPSGGES GPGRPIKPAL EQKLKVNEMN
FQQKSDKGTI QKRPVAPQQN KLRHSDEDAV QVKLEATKRK LQERYQEVEN GWSSLLFKLF
GYFTGYIQFV FSFLMKTLK
//
