ID M1CVJ9_SOLTU Unreviewed; 330 AA.
AC M1CVJ9;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE SubName: Full=B-box zinc finger protein 16 {ECO:0000313|EMBL:ARU77855.1};
DE SubName: Full=Salt-tolerance protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400075652};
GN Name=102590610 {ECO:0000313|EnsemblPlants:PGSC0003DMT400075652};
GN Synonyms=BBX16 {ECO:0000313|EMBL:ARU77855.1};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400075652, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400075652}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400075652};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
RN [3] {ECO:0000313|EMBL:ARU77855.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=28552939;
RA Talar U., Kielbowicz-Matuk A., Czarnecka J., Rorat T.;
RT "Genome-wide survey of B-box proteins in potato (Solanum tuberosum)-
RT Identification, characterization and expression patterns during diurnal
RT cycle, etiolation and de-etiolation.";
RL PLoS ONE 12:E0177471-E0177471(2017).
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DR EMBL; KX576526; ARU77855.1; -; mRNA.
DR RefSeq; XP_006342575.1; XM_006342513.2.
DR AlphaFoldDB; M1CVJ9; -.
DR STRING; 4113.M1CVJ9; -.
DR PaxDb; 4113-PGSC0003DMT400075652; -.
DR EnsemblPlants; PGSC0003DMT400075652; PGSC0003DMT400075652; PGSC0003DMG400029426.
DR GeneID; 102590610; -.
DR Gramene; PGSC0003DMT400075652; PGSC0003DMT400075652; PGSC0003DMG400029426.
DR Gramene; RHC12H1G2377.2.1; RHC12H1G2377.2.1; RHC12H1G2377.2.
DR KEGG; sot:102590610; -.
DR eggNOG; ENOG502QUWE; Eukaryota.
DR HOGENOM; CLU_025298_4_0_1; -.
DR InParanoid; M1CVJ9; -.
DR OMA; AIMCREC; -.
DR OrthoDB; 1116590at2759; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009640; P:photomorphogenesis; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IBA:GO_Central.
DR CDD; cd19821; Bbox1_BBX-like; 2.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR InterPro; IPR049808; CONSTANS-like_Bbox1.
DR InterPro; IPR000315; Znf_B-box.
DR PANTHER; PTHR31832:SF77; B BOX-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR31832; B-BOX ZINC FINGER PROTEIN 22; 1.
DR Pfam; PF00643; zf-B_box; 2.
DR SMART; SM00336; BBOX; 2.
DR PROSITE; PS50119; ZF_BBOX; 2.
PE 2: Evidence at transcript level;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00024};
KW Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00024};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00024}.
FT DOMAIN 1..47
FT /note="B box-type"
FT /evidence="ECO:0000259|PROSITE:PS50119"
FT DOMAIN 53..100
FT /note="B box-type"
FT /evidence="ECO:0000259|PROSITE:PS50119"
FT REGION 310..330
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 330 AA; 36491 MW; 47316C2D74B09FDB CRC64;
MKIQCDVCNK KEAVVFCTAD EAALCDDCDH RVHHVNKLAS KHQRFSLLQP SPKQAPMCDI
CQERRGFLFC QQDRAIMCRE CDIPIHKANE HTQKHNRYLL TGIKLSANSD LYSAPSQLQS
QSQSQSAISS ADLCVSNLKS QNPISKSVAG SVSVSSTNTS NTKGGAVSSV VESVKVVKEK
VGGCNNNVQL VNGGGNNLTS SISEYLEMLP GWHVEDFLDC STPNVYSKNI GDEDMLSFWD
TDLESQLSSF PPQNVGIWVP QAPPLPESKQ ETQIQFFPSQ NLNFGGKIGL KESREVTNIK
SSRKWTDDNS FAVPQMKPPS TSFKRSRTLW
//
