ID M1D5U4_SOLTU Unreviewed; 439 AA.
AC M1D5U4;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 57.
DE RecName: Full=COP9 signalosome complex subunit 2 {ECO:0000256|ARBA:ARBA00014879};
GN Name=102593504 {ECO:0000313|EnsemblPlants:PGSC0003DMT400082384};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400082384, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400082384}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400082384};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the CSN2 family.
CC {ECO:0000256|ARBA:ARBA00009318}.
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DR RefSeq; XP_006356365.1; XM_006356303.2.
DR AlphaFoldDB; M1D5U4; -.
DR STRING; 4113.M1D5U4; -.
DR PaxDb; 4113-PGSC0003DMT400082384; -.
DR EnsemblPlants; PGSC0003DMT400082384; PGSC0003DMT400082384; PGSC0003DMG400032509.
DR GeneID; 102593504; -.
DR Gramene; PGSC0003DMT400082384; PGSC0003DMT400082384; PGSC0003DMG400032509.
DR KEGG; sot:102593504; -.
DR eggNOG; KOG1464; Eukaryota.
DR HOGENOM; CLU_028981_0_0_1; -.
DR InParanoid; M1D5U4; -.
DR OMA; WMLAYNE; -.
DR OrthoDB; 5477605at2759; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR ExpressionAtlas; M1D5U4; baseline.
DR GO; GO:0008180; C:COP9 signalosome; IBA:GO_Central.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0000338; P:protein deneddylation; IBA:GO_Central.
DR Gene3D; 1.25.40.570; -; 1.
DR InterPro; IPR000717; PCI_dom.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR10678; 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2; 1.
DR PANTHER; PTHR10678:SF3; COP9 SIGNALOSOME COMPLEX SUBUNIT 2; 1.
DR Pfam; PF01399; PCI; 1.
DR SMART; SM00753; PAM; 1.
DR SMART; SM00088; PINT; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50250; PCI; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000011115}.
FT DOMAIN 243..412
FT /note="PCI"
FT /evidence="ECO:0000259|PROSITE:PS50250"
FT REGION 1..23
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 439 AA; 51496 MW; 7F4CC60F8A68592A CRC64;
MGSDADMEDY GFEYSEEEPE EQDVDIENQY YNSKGLAETD PEAALEGFAE VVHMEPEKAD
WGFKALKQTV KLYYKLGKYK EMMDAYREML TYIKSAVTRN YSEKCINNIM DFVSGSASQN
FDLLQEFYQT TLKALEEAKN ERLWFKTNLK LCKIWFDIWE YGRMNKILKQ LHKSCQKEDG
TADQKKGTQL LEVYAIEIQM YTETKNNKKL KELYTKALSV KSAIPHPRIM GIIRECGGKM
HMAERQWAEA ATDFFEAFKN YDEAGNQRRI QCLKYLVLAN MLMESEVNPF DGQEAKPYKN
DPEILAMTNL IAAYQRNEIL EFEKILKSNR RTIMDDPFIR NYIEDLLRNV RTQVLLKIIK
PYTRIRIPFI SKELNVPEND VEELLVSLIL DNRIHGHIDQ VNRLLECGDR SKEMKKYAAI
DKWNTQLRSL YQTVGNRVC
//
