ID M1D7Y9_SOLTU Unreviewed; 262 AA.
AC M1D7Y9;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 46.
DE SubName: Full=Zinc finger protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400084751};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400084751, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400084751}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400084751};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
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DR AlphaFoldDB; M1D7Y9; -.
DR SMR; M1D7Y9; -.
DR STRING; 4113.M1D7Y9; -.
DR PaxDb; 4113-PGSC0003DMT400084751; -.
DR EnsemblPlants; PGSC0003DMT400084751; PGSC0003DMT400084751; PGSC0003DMG400034322.
DR Gramene; PGSC0003DMT400084751; PGSC0003DMT400084751; PGSC0003DMG400034322.
DR Gramene; RHC01H1G4244.2.1; RHC01H1G4244.2.1.cds.1; RHC01H1G4244.2.
DR eggNOG; KOG1721; Eukaryota.
DR HOGENOM; CLU_059471_1_2_1; -.
DR InParanoid; M1D7Y9; -.
DR OMA; DSWAKGK; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR ExpressionAtlas; M1D7Y9; baseline and differential.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IBA:GO_Central.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR InterPro; IPR044653; AZF1/2/3-like.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR45988; C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED; 1.
DR PANTHER; PTHR45988:SF88; ZINC FINGER PROTEIN 1; 1.
DR Pfam; PF13912; zf-C2H2_6; 2.
DR SMART; SM00355; ZnF_C2H2; 2.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 2.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 2.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT DOMAIN 100..122
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 157..184
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 1..44
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 124..151
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 20..41
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 128..151
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 262 AA; 28016 MW; FD9A37C8225B185D CRC64;
MSIEALKSPT AAALPPLEEI DDSHNLDSWA KGKRSKRPRI ENPPTPDQYL ALCLLMLAND
DGTGFGKGKG TGSIGVVIEQ QQEKKLLKPV FIKEKTEQLF KCSECPKVFT SYQALGGHKA
SHRKINVPAT GNDDNNPSTS TSTSGNISAL NPSGRSHVCS VCQKAFPTGQ ALGGHKRRHY
EGKLGGNNRY ISGEGLQSGS VVTTSDGGGA STPIARDFDL NMPASPGCQL DLTIDCGGRS
QHPIEQEVES PMPAKKPRLF FD
//
