ID M1DC23_SOLTU Unreviewed; 440 AA.
AC M1DC23;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 45.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400086579};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400086579, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400086579}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400086579};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR AlphaFoldDB; M1DC23; -.
DR STRING; 4113.M1DC23; -.
DR PaxDb; 4113-PGSC0003DMT400086579; -.
DR EnsemblPlants; PGSC0003DMT400086579; PGSC0003DMT400086579; PGSC0003DMG400036150.
DR Gramene; PGSC0003DMT400086579; PGSC0003DMT400086579; PGSC0003DMG400036150.
DR eggNOG; KOG1001; Eukaryota.
DR eggNOG; KOG1002; Eukaryota.
DR HOGENOM; CLU_000315_2_8_1; -.
DR InParanoid; M1DC23; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0008094; F:ATP-dependent activity, acting on DNA; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006289; P:nucleotide-excision repair; IBA:GO_Central.
DR CDD; cd18793; SF2_C_SNF; 2.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR018957; Znf_C3HC4_RING-type.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR45626:SF46; HELICASE ATP-BINDING DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR45626; TRANSCRIPTION TERMINATION FACTOR 2-RELATED; 1.
DR Pfam; PF00271; Helicase_C; 2.
DR Pfam; PF00097; zf-C3HC4; 1.
DR SMART; SM00490; HELICc; 2.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 156..196
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 311..440
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
SQ SEQUENCE 440 AA; 49415 MW; F61B3C355448BC3A CRC64;
MGKTVQAIAL VELQKDSTIL SSSSTTSLPY IEIPLKLRSN NEERRDAMVF LKHRILEKLL
LKRTKKERVA DLALSTKTVT TRRDSLDIGE YETYKTLFRR SREQLDSVHD GTLMKNYFLM
FPMIVRLRQV VDHHYYGSLT ELASGNKEAG DVEQACALRQ DAVEDPVVTS CSHVFCKACL
IDFVVSMGRM ACPSCTEPLT FDFTANNDNG DSNSEPTVKG FSSSSILNKI HRNEFETSTK
LEALLSGVNC VQLVGSMSVT ARDAAVNKFT EHSDFRILLM SLKDGGVSLN VKVASHVCLM
DTWWNPAVEQ QAQDRIHRIW QHKPVKCQFS AECLSKLTIK ETCIVCIQLS GVNCVQLVGS
MSVTARDAAV NKFTEHSDFR ILLMSLKDGG VSLNVKVASH VCLMDTWWNP AVEQQAQDRI
HRIWQHKPVK CQFSAECLSK
//
