ID M1DET5_SOLTU Unreviewed; 237 AA.
AC M1DET5;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 08-NOV-2023, entry version 28.
DE SubName: Full=Retrotransposon gag protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400087903};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400087903, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400087903}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400087903};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
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DR AlphaFoldDB; M1DET5; -.
DR PaxDb; 4113-PGSC0003DMT400087903; -.
DR EnsemblPlants; PGSC0003DMT400087903; PGSC0003DMT400087903; PGSC0003DMG400037474.
DR Gramene; PGSC0003DMT400087903; PGSC0003DMT400087903; PGSC0003DMG400037474.
DR HOGENOM; CLU_1172413_0_0_1; -.
DR InParanoid; M1DET5; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR InterPro; IPR001878; Znf_CCHC.
DR Pfam; PF00098; zf-CCHC; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 42..56
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 58..91
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 103..126
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 237 AA; 25905 MW; 1B4456198E5243EE CRC64;
MPTSCLSNRN RRVAQGGDWA PTCARCGIIH PGKCRDGQSG YFKCGQEGHF KKECPEKWQG
SGNQGYRVQS SSVAPPDRVA PRGANFGTGG GTNRLYAINS LQEQEDSPDV VTVSPPDRVA
PRGANFGTGG GTNRLYAINS LQEQEDSPDV VTVNYIRVKP EGDQFIQLEN TLGLGEHRKE
ERRKGTSRIR KEQSILVVDS PRNSSYNVCE SLIALGSFTH APNMFSSAKL VLKEFES
//