ID M1MQH8_9CLOT Unreviewed; 328 AA.
AC M1MQH8;
DT 01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 01-MAY-2013, sequence version 1.
DT 27-MAR-2024, entry version 49.
DE SubName: Full=Site-specific recombinase XerD {ECO:0000313|EMBL:AGF57001.1};
GN Name=xerD7 {ECO:0000313|EMBL:AGF57001.1};
GN ORFNames=Cspa_c32400 {ECO:0000313|EMBL:AGF57001.1};
OS Clostridium saccharoperbutylacetonicum N1-4(HMT).
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=931276 {ECO:0000313|EMBL:AGF57001.1, ECO:0000313|Proteomes:UP000011728};
RN [1] {ECO:0000313|EMBL:AGF57001.1, ECO:0000313|Proteomes:UP000011728}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=N1-4(HMT) {ECO:0000313|Proteomes:UP000011728};
RA Poehlein A., Daniel R.;
RT "Genome sequence of Clostridium saccharoperbutylacetonicum N1-4(HMT).";
RL Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Site-specific tyrosine recombinase, which acts by catalyzing
CC the cutting and rejoining of the recombining DNA molecules.
CC {ECO:0000256|ARBA:ARBA00003283}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- SIMILARITY: Belongs to the 'phage' integrase family.
CC {ECO:0000256|ARBA:ARBA00008857}.
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DR EMBL; CP004121; AGF57001.1; -; Genomic_DNA.
DR RefSeq; WP_015393319.1; NZ_AOIF01000069.1.
DR AlphaFoldDB; M1MQH8; -.
DR STRING; 36745.CLSAP_30480; -.
DR KEGG; csr:Cspa_c32400; -.
DR PATRIC; fig|931276.5.peg.3262; -.
DR eggNOG; COG4974; Bacteria.
DR HOGENOM; CLU_027562_9_6_9; -.
DR OrthoDB; 283809at2; -.
DR Proteomes; UP000011728; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0015074; P:DNA integration; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR InterPro; IPR044068; CB.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR InterPro; IPR004107; Integrase_SAM-like_N.
DR PANTHER; PTHR30349:SF41; INTEGRASE_RECOMBINASE HI_1414-RELATED; 1.
DR PANTHER; PTHR30349; PHAGE INTEGRASE-RELATED; 1.
DR Pfam; PF02899; Phage_int_SAM_1; 1.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR PROSITE; PS51900; CB; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 3: Inferred from homology;
KW DNA integration {ECO:0000256|ARBA:ARBA00022908};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU01248}; Reference proteome {ECO:0000313|Proteomes:UP000011728}.
FT DOMAIN 11..116
FT /note="Core-binding (CB)"
FT /evidence="ECO:0000259|PROSITE:PS51900"
FT DOMAIN 138..321
FT /note="Tyr recombinase"
FT /evidence="ECO:0000259|PROSITE:PS51898"
SQ SEQUENCE 328 AA; 38132 MW; C5EF9495E1BABBC8 CRC64;
MSYDFDIFAN NKLPVSAVDF LTYLETIKNK SENTINAYRK DLIIFFRFML KYRGLTSEEI
EFDDIDITSI NDEFIKSIRL RDLYAFMSFT EKYRQNSAYA RARKVATLKS YFKFLQGKAK
IITENPTLEL ESPKVNKRHP IYLTLNQSLH LLESLDKKNK NYQRDYCILT LFLNCGMRLS
ELCSIQLTKF KGDTLSIIGK GDKERTVYLN DACLKALDNY LKVRDDSKAL PEDKKYLFLS
SRNTPINQRT VEIMIKKHIT NAGLTDDKYT PHKLRHTAAT LMYKYGNVDI RSLQSILGHE
NISTTQIYTH VDDDSLRDAV KSNPLSKL
//
