ID M1V632_CYAM1 Unreviewed; 1250 AA.
AC M1V632;
DT 01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 01-MAY-2013, sequence version 1.
DT 24-JAN-2024, entry version 48.
DE SubName: Full=Probable tRNA splicing endonuclease positive effector Sen1p {ECO:0000313|EMBL:BAM81715.1};
GN ORFNames=CYME_CMP054C {ECO:0000313|EMBL:BAM81715.1};
OS Cyanidioschyzon merolae (strain NIES-3377 / 10D) (Unicellular red alga).
OC Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae;
OC Cyanidioschyzon.
OX NCBI_TaxID=280699 {ECO:0000313|EMBL:BAM81715.1, ECO:0000313|Proteomes:UP000007014};
RN [1] {ECO:0000313|EMBL:BAM81715.1, ECO:0000313|Proteomes:UP000007014}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=10D {ECO:0000313|EMBL:BAM81715.1,
RC ECO:0000313|Proteomes:UP000007014};
RX PubMed=15071595; DOI=10.1038/nature02398;
RA Matsuzaki M., Misumi O., Shin-i T., Maruyama S., Takahara M.,
RA Miyagishima S., Mori T., Nishida K., Yagisawa F., Nishida K., Yoshida Y.,
RA Nishimura Y., Nakao S., Kobayashi T., Momoyama Y., Higashiyama T.,
RA Minoda A., Sano M., Nomoto H., Oishi K., Hayashi H., Ohta F., Nishizaka S.,
RA Haga S., Miura S., Morishita T., Kabeya Y., Terasawa K., Suzuki Y.,
RA Ishii Y., Asakawa S., Takano H., Ohta N., Kuroiwa H., Tanaka K.,
RA Shimizu N., Sugano S., Sato N., Nozaki H., Ogasawara N., Kohara Y.,
RA Kuroiwa T.;
RT "Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon
RT merolae 10D.";
RL Nature 428:653-657(2004).
RN [2] {ECO:0000313|EMBL:BAM81715.1, ECO:0000313|Proteomes:UP000007014}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=10D {ECO:0000313|EMBL:BAM81715.1,
RC ECO:0000313|Proteomes:UP000007014};
RX PubMed=17623057; DOI=10.1186/1741-7007-5-28;
RA Nozaki H., Takano H., Misumi O., Terasawa K., Matsuzaki M., Maruyama S.,
RA Nishida K., Yagisawa F., Yoshida Y., Fujiwara T., Takio S., Tamura K.,
RA Chung S.J., Nakamura S., Kuroiwa H., Tanaka K., Sato N., Kuroiwa T.;
RT "A 100%-complete sequence reveals unusually simple genomic features in the
RT hot-spring red alga Cyanidioschyzon merolae.";
RL BMC Biol. 5:28-28(2007).
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DR EMBL; AP006498; BAM81715.1; -; Genomic_DNA.
DR RefSeq; XP_005537751.1; XM_005537694.1.
DR AlphaFoldDB; M1V632; -.
DR STRING; 280699.M1V632; -.
DR EnsemblPlants; CMP054CT; CMP054CT; CMP054C.
DR GeneID; 16995985; -.
DR Gramene; CMP054CT; CMP054CT; CMP054C.
DR KEGG; cme:CYME_CMP054C; -.
DR eggNOG; KOG1801; Eukaryota.
DR HOGENOM; CLU_265858_0_0_1; -.
DR OrthoDB; 170190at2759; -.
DR Proteomes; UP000007014; Chromosome 16.
DR GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:InterPro.
DR CDD; cd18042; DEXXQc_SETX; 1.
DR CDD; cd18808; SF1_C_Upf1; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR045055; DNA2/NAM7-like.
DR InterPro; IPR041679; DNA2/NAM7-like_C.
DR InterPro; IPR041677; DNA2/NAM7_AAA_11.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR047187; SF1_C_Upf1.
DR PANTHER; PTHR10887; DNA2/NAM7 HELICASE FAMILY; 1.
DR PANTHER; PTHR10887:SF490; PROTEIN ZGRF1; 1.
DR Pfam; PF13086; AAA_11; 2.
DR Pfam; PF13087; AAA_12; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 4: Predicted;
KW Endonuclease {ECO:0000313|EMBL:BAM81715.1};
KW Hydrolase {ECO:0000313|EMBL:BAM81715.1};
KW Nuclease {ECO:0000313|EMBL:BAM81715.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000007014}.
FT DOMAIN 398..683
FT /note="DNA2/NAM7 helicase helicase"
FT /evidence="ECO:0000259|Pfam:PF13086"
FT DOMAIN 711..766
FT /note="DNA2/NAM7 helicase helicase"
FT /evidence="ECO:0000259|Pfam:PF13086"
FT DOMAIN 773..980
FT /note="DNA2/NAM7 helicase-like C-terminal"
FT /evidence="ECO:0000259|Pfam:PF13087"
FT REGION 198..218
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 292..326
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 458..484
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1021..1075
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1205..1250
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 469..483
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1021..1051
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1250 AA; 135683 MW; 71FC6974865DF849 CRC64;
MTENVSLPFF WFEGTFTLDQ EFPTERLRAA RGEAYRCKMP LGDSPVAATP ARTPSNASGH
TADTVANTVS LFWYRLREQN TLPTAFISTT GAPFANVNVG MRAALDRILS SEPKNWPNSL
TSVNAVAGAC KRSSEAENLP FRNPDEYIAF FTQLVDIEVC SELYNAFDSV LRTLSAALTP
EKSGLVVLVS TRGDPVPVEP RGATKVSAEP VSTHDEPGSS ALVEVPIKIQ SKETIFDHDI
LLLLPCTRED QRLTGAQLRE IRQQPLLGIV QHRAGSPLML RMQRARAEAW LEQQQQQQQQ
QQRQWETART DCSSGPLNSA IGSENAACTP PTPAIRLMST LNHARELGAL SSIAEMELAP
VILDPAGAAA EQQRELAPGP QRSELDAYLA VISNQRGLNR SQYEAVRASV HRQRGFALIH
GPPGTGKTKT LLSLLNLLHM SKYQEYYDAY LSALGSPAAQ EEERPRTSCD QSTLPTAGTD
STPKPILEQL LDSVRNTTAA ATAAVKLSAL RTARHTAALQ RKPRLLVTAQ SNAAVDEIVV
RIMREGFVDG KLRTYYPDIV RIGAGARVHP KARAVTAEAR AEAFLQALES AKHSAEWIQH
WEQQCRALLG QLETPAPPQH DLEARGRLMR LWDRLDRLQR DERRYRMATW PDQRISREQR
IAWIAGTYLE EAEIVLCTLS GAALIKSWLR DAPLASEARS LPERSGESVS TLDGAFQARA
STFPIVVIDE AAQATELATL IPLQYGCERC VLAGDPQQLP ATVFSRGDAG VALARSLMER
LLQAGWTGHL LDTQYRMHPA IATFPTRWFY QNQLKNDDCV RSELYRPAFH RTGPPPPLLG
PYCFVDIAEA TEERDATTAS LSNPKEAAFA MQLVEILYER YWKASDRVWH LGILTPYRAQ
MRLLQQALDQ SGLILPGQQM PCTIEIDTVD AFQGREKDVI IFSAVRTAQH RSGIGFVGDV
RRLNVALTRA KVSLVVLGHA AALRAHSADW DALLCDAEQR GLYFESSSDL VQSWLQRHRS
SATASGSGSG AAGSIPPRPS STRSVSSDAM DTRDGAATPA AAASSQAPTS AARDSSTGAA
STAAVAFASA LDPRLQRTAA VYSIRNGSDA PISGGVSGQS TPQVQAAAID ARSFMIASLT
AGFSLPSVVA AAYQAFPHEA DQVAQLATEL AAQTGAVLAA MVTNAPQHAV ETVGRARRAC
ARRKHKATGL RERTASKHGS VGNPLHQRHS GEGANGAASE AASTSTRSPR
//