ID M1WFN5_CLAP2 Unreviewed; 1212 AA.
AC M1WFN5;
DT 01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 01-MAY-2013, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE SubName: Full=Related to splicing factor 3B subunit 3 (Spliceosomal protein sap130) {ECO:0000313|EMBL:CCE31069.1};
GN ORFNames=CPUR_04920 {ECO:0000313|EMBL:CCE31069.1};
OS Claviceps purpurea (strain 20.1) (Ergot fungus) (Sphacelia segetum).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Hypocreomycetidae; Hypocreales; Clavicipitaceae; Claviceps.
OX NCBI_TaxID=1111077 {ECO:0000313|EMBL:CCE31069.1, ECO:0000313|Proteomes:UP000016801};
RN [1] {ECO:0000313|EMBL:CCE31069.1, ECO:0000313|Proteomes:UP000016801}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=20.1 {ECO:0000313|EMBL:CCE31069.1,
RC ECO:0000313|Proteomes:UP000016801};
RX PubMed=23468653; DOI=10.1371/journal.pgen.1003323;
RA Schardl C.L., Young C.A., Hesse U., Amyotte S.G., Andreeva K., Calie P.J.,
RA Fleetwood D.J., Haws D.C., Moore N., Oeser B., Panaccione D.G.,
RA Schweri K.K., Voisey C.R., Farman M.L., Jaromczyk J.W., Roe B.A.,
RA O'Sullivan D.M., Scott B., Tudzynski P., An Z., Arnaoudova E.G.,
RA Bullock C.T., Charlton N.D., Chen L., Cox M., Dinkins R.D., Florea S.,
RA Glenn A.E., Gordon A., Gueldener U., Harris D.R., Hollin W., Jaromczyk J.,
RA Johnson R.D., Khan A.K., Leistner E., Leuchtmann A., Li C., Liu J., Liu J.,
RA Liu M., Mace W., Machado C., Nagabhyru P., Pan J., Schmid J., Sugawara K.,
RA Steiner U., Takach J.E., Tanaka E., Webb J.S., Wilson E.V., Wiseman J.L.,
RA Yoshida R., Zeng Z.;
RT "Plant-symbiotic fungi as chemical engineers: Multi-genome analysis of the
RT Clavicipitaceae reveals dynamics of alkaloid loci.";
RL PLoS Genet. 9:E1003323-E1003323(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the RSE1 family.
CC {ECO:0000256|ARBA:ARBA00038266}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCE31069.1}.
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DR EMBL; CAGA01000027; CCE31069.1; -; Genomic_DNA.
DR AlphaFoldDB; M1WFN5; -.
DR STRING; 1111077.M1WFN5; -.
DR VEuPathDB; FungiDB:CPUR_04920; -.
DR eggNOG; KOG1898; Eukaryota.
DR HOGENOM; CLU_003246_0_0_1; -.
DR OrthoDB; 101343at2759; -.
DR PhylomeDB; M1WFN5; -.
DR Proteomes; UP000016801; Unassembled WGS sequence.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 3.
DR InterPro; IPR004871; Cleavage/polyA-sp_fac_asu_C.
DR InterPro; IPR018846; Cleavage/polyA-sp_fac_asu_N.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR PANTHER; PTHR10644; DNA REPAIR/RNA PROCESSING CPSF FAMILY; 1.
DR PANTHER; PTHR10644:SF1; SPLICING FACTOR 3B SUBUNIT 3; 1.
DR Pfam; PF03178; CPSF_A; 1.
DR Pfam; PF10433; MMS1_N; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
PE 3: Inferred from homology;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022728};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00022728};
KW Reference proteome {ECO:0000313|Proteomes:UP000016801};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728}.
FT DOMAIN 82..610
FT /note="Cleavage/polyadenylation specificity factor A
FT subunit N-terminal"
FT /evidence="ECO:0000259|Pfam:PF10433"
FT DOMAIN 856..1178
FT /note="Cleavage/polyadenylation specificity factor A
FT subunit C-terminal"
FT /evidence="ECO:0000259|Pfam:PF03178"
SQ SEQUENCE 1212 AA; 133316 MW; 37C6BD5A83084C54 CRC64;
MATTSNMFLY SLTVQPPNNV VQAVLGQFAG TKEQLIITGA GSQLTLLRPD PSLGKVTTVL
SHNIFGIIRS LAAFRLAGSS KDYLILATDS GRITIVEYLP AQNRFSRLHL ETFGKSGVRR
VIPGEYLACD PKGRACLIAS TEKNKLVYVL NRSPQAELTI SSPLEAHKPG VLVIAMTALD
VGYANPVFAA LEMDYSEADQ DATGQALEEV ETQLVYYELD LGLNHVVRKW SEPVDPTASI
LFQVPGGNDG PSGVLVCGEE SITYRHSNQD AFRVPIPRRK GATEDPLRKR VIVSGVMHKL
KGSAGAFFFL LQTEDGDLFK VTIDMVEDEE GNPTGEVRRL KIKYFDTVPV ASSLCILKSG
FLYVASQFGN FSFYQFEKLG DDDDETEFSS DDFPVDPQAS YDPVYFYPRP ADNLALVESV
PSMNPLMDCK VANLTGEDAP QIYTVCGNGA RSTFRMLRHG LEVNEIVASE LPGIPSAVWT
LKLNRGEQYD AYIVLSFTNG TLVLSIGETV EEVSDSGFST SVPTLAAQLL GDDGLIQVHP
KGIRHIRNGK VNEWDAPQHR SIVAATTNAH QVAIALSSGE IVYFEMDTDG SLAEYDEKKE
MFGTVTCLSL GEVPEGRVRS SFLAVGCDDC TVRILSLDPD STLESKSVQA LTAAPSSLAI
IAMDDSSSGG STLYLHIGLH SGVYLRTVLD EVTGELTDTR QKFLGPKQVR LFQVTVQGTT
CVLGLSSRPW LGYSDPISKS FVVTPLNYVD LEWGWNFSSE QCEEGIVGIQ GQSLRIFSID
RLGDTLTQKS VALTYTPRKL IKHPEQPLFY TIESDNNTLP PDLRAQLLAD PAAVNGNSTV
LPPEEFGHPR GTHRWASCIN VIDPTDEEPQ VLQTVDFENN EAAVSAAIVP FASQDNESFL
IVGTGKDVIV NPRSFSEAYI YVYRFQADGR ELEFIHKTKI EEPPMALLPF QGKLLAGVGK
TLRIYDLGMR QMLRKAQTEV ASHQIVSLNT QGSRIIVGDV QQGVTYVTYK PTTNKLIPFV
DDSTTRWITC TTMVDYESVA GGDKFGNIFI VRCPSKASEE ADEEQSGVHL MNARNYLHGT
SQRVDLMCHF YAQDIPTSMA KTSLVVGGQE VLLWSGLMGT IGVFIPLVSR EDADFFQSLE
QHLRTEDAPL AGRDHLMYRG YYAPVKGIID GDLCERYTLL SNDKKKMIAS ELDRSVREIE
RKISDIRTRS AF
//
