ID M1WQQ4_PSEP2 Unreviewed; 453 AA.
AC M1WQQ4;
DT 01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 01-MAY-2013, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE RecName: Full=Radical SAM core domain-containing protein {ECO:0000259|PROSITE:PS51918};
GN OrderedLocusNames=BN4_11874 {ECO:0000313|EMBL:CCH49109.1};
OS Pseudodesulfovibrio piezophilus (strain DSM 21447 / JCM 15486 / C1TLV30)
OS (Desulfovibrio piezophilus).
OC Bacteria; Thermodesulfobacteriota; Desulfovibrionia; Desulfovibrionales;
OC Desulfovibrionaceae.
OX NCBI_TaxID=1322246 {ECO:0000313|EMBL:CCH49109.1, ECO:0000313|Proteomes:UP000011724};
RN [1] {ECO:0000313|EMBL:CCH49109.1, ECO:0000313|Proteomes:UP000011724}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 10523 / SB164P1 {ECO:0000313|Proteomes:UP000011724};
RX PubMed=23383081; DOI=10.1371/journal.pone.0055130;
RA Pradel N., Ji B., Gimenez G., Talla E., Lenoble P., Garel M., Tamburini C.,
RA Fourquet P., Lebrun R., Bertin P., Denis Y., Pophillat M., Barbe V.,
RA Ollivier B., Dolla A.;
RT "The first genomic and proteomic characterization of a deep-sea sulfate
RT reducer: insights into the piezophilic lifestyle of Desulfovibrio
RT piezophilus.";
RL PLoS ONE 8:e55130-e55130(2013).
RN [2] {ECO:0000313|Proteomes:UP000011724}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 10523 / SB164P1 {ECO:0000313|Proteomes:UP000011724};
RX PubMed=23961312; DOI=10.4056/sigs.3777412;
RA Finster K.W., Kjeldsen K.U., Kube M., Reinhardt R., Mussmann M., Amann R.,
RA Schreiber L.;
RT "Complete genome sequence of Desulfocapsa sulfexigens, a marine
RT deltaproteobacterium specialized in disproportionating inorganic sulfur
RT compounds.";
RL Stand. Genomic Sci. 8:58-68(2013).
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DR EMBL; FO203427; CCH49109.1; -; Genomic_DNA.
DR RefSeq; WP_015415153.1; NC_020409.1.
DR AlphaFoldDB; M1WQQ4; -.
DR STRING; 1322246.BN4_11874; -.
DR KEGG; dpi:BN4_11874; -.
DR PATRIC; fig|879567.3.peg.1977; -.
DR eggNOG; COG1964; Bacteria.
DR HOGENOM; CLU_023791_0_0_7; -.
DR OrthoDB; 9782387at2; -.
DR BioCyc; DPIE1322246:BN4_RS09400-MONOMER; -.
DR Proteomes; UP000011724; Chromosome.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0051536; F:iron-sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd01335; Radical_SAM; 1.
DR Gene3D; 3.20.20.70; Aldolase class I; 1.
DR InterPro; IPR013785; Aldolase_TIM.
DR InterPro; IPR034474; Methyltransferase_Class_D.
DR InterPro; IPR007197; rSAM.
DR PANTHER; PTHR43306; 7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN DIMETHYLTRANSFERASE; 1.
DR PANTHER; PTHR43306:SF1; 7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN DIMETHYLTRANSFERASE; 1.
DR Pfam; PF04055; Radical_SAM; 1.
DR SFLD; SFLDG01100; methyltransferase_(Class_D); 1.
DR SFLD; SFLDS00029; Radical_SAM; 1.
DR SFLD; SFLDG01067; SPASM/twitch_domain_containing; 1.
DR SUPFAM; SSF102114; Radical SAM enzymes; 1.
DR PROSITE; PS51918; RADICAL_SAM; 1.
PE 4: Predicted;
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000011724};
KW S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691}.
FT DOMAIN 84..302
FT /note="Radical SAM core"
FT /evidence="ECO:0000259|PROSITE:PS51918"
SQ SEQUENCE 453 AA; 48830 MW; B1B32855FAC96080 CRC64;
MSALPRSVCP VCLAPVIATH ESVNGETFLV KECPEHGVFR TVVWRGTPDF HGWSRAKIPS
LPKEPLTKVE KGCPNDCGLC GAHRQHTCTA LIEVTWRCDL GCPVCFASSG KQAQTDPAVE
EIGFLLDRVI RISGLCNIQL SGGEPTVRDD LPALIRLARG KGFPFVQLNT NGLRLAREPG
YAATLAEAGL SSVFLQFDGT SDDIYGSLRG KPLLADKIAA MEALTEVGVG VVLVPTVVPG
VNEHDLGAIV RLASLHSPGV RGVHFQPVSY FGRYPDAPDD AQRITLPELM RSLEEQTGGS
IRAIDFQPPG CEHSHCSFHA NYVVTESRAL KRLSAKGQCG CAPRPAEEGA DKAKAFVKRQ
WAAPGTSLPM AHAMTTDVPD ELDVFIERAA THTLAISAMA FQDAWTLDLE RLKGCCIHVV
SPDGRLIPFC AYNLTSMDGE SLYRGKCHGP VQS
//
