ID M1YV68_NITG3 Unreviewed; 620 AA.
AC M1YV68;
DT 01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 01-MAY-2013, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE SubName: Full=Putative Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:CCQ89199.1};
GN ORFNames=NITGR_100004 {ECO:0000313|EMBL:CCQ89199.1};
OS Nitrospina gracilis (strain 3/211).
OC Bacteria; Nitrospinae/Tectomicrobia group; Nitrospinota; Nitrospinia;
OC Nitrospinales; Nitrospinaceae; Nitrospina.
OX NCBI_TaxID=1266370 {ECO:0000313|EMBL:CCQ89199.1, ECO:0000313|Proteomes:UP000011704};
RN [1] {ECO:0000313|EMBL:CCQ89199.1, ECO:0000313|Proteomes:UP000011704}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=3/211 {ECO:0000313|EMBL:CCQ89199.1,
RC ECO:0000313|Proteomes:UP000011704};
RX PubMed=23439773; DOI=10.3389/fmicb.2013.00027;
RA Luecker S., Nowka B., Rattei T., Spieck E., and Daims H.;
RT "The genome of Nitrospina gracilis illuminates the metabolism and evolution
RT of the major marine nitrite oxidizer.";
RL Front. Microbiol. 4:27-27(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCQ89199.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CAQJ01000002; CCQ89199.1; -; Genomic_DNA.
DR AlphaFoldDB; M1YV68; -.
DR STRING; 1266370.NITGR_100004; -.
DR HOGENOM; CLU_011615_5_0_0; -.
DR InParanoid; M1YV68; -.
DR OrthoDB; 9797765at2; -.
DR Proteomes; UP000011704; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR006597; Sel1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR44227; -; 1.
DR PANTHER; PTHR44227:SF3; PROTEIN O-MANNOSYL-TRANSFERASE TMTC4; 1.
DR Pfam; PF13424; TPR_12; 1.
DR Pfam; PF13432; TPR_16; 1.
DR Pfam; PF14559; TPR_19; 1.
DR SMART; SM00671; SEL1; 3.
DR SMART; SM00028; TPR; 6.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50005; TPR; 5.
DR PROSITE; PS50293; TPR_REGION; 2.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000011704};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW ProRule:PRU00339}; Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 59..80
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 92..109
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 121..139
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 151..181
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 267..285
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 297..319
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 325..346
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 353..375
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REPEAT 400..433
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 467..500
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 501..534
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 535..568
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 569..602
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
SQ SEQUENCE 620 AA; 71517 MW; C145B69EA57B28BA CRC64;
MDWDDNGYIL GNTMIRSLAP ENILHMLISL QPFYWQPMTW LSHAIDYRLF GLEPAGHHFV
SIVLHGINAF LVFLLIFHFA NRAYPGLRGR SGVLLACAWA ALVFAVHPLR VESVVWAAER
KDLLCALFMF SALLVYLWYA DATEKAERQR WYKWVLFLFL LALMSKPMAV TFPVVVLILD
LYPLNRISSR TDAWKCFTEK IPHFVMSFAT AVITFIAQKI QGAVVAIDEL SFTVRIVNAL
RSTVFYIEKT LWPQPLVPLY PFPDWDVRMW LEVATFFVIC WFCIVKWNEG RRYWMAVWLI
YLVTLSPVIG IIQVGGQAAA DRFTYIPTLG FYVLLALGVI RLWRFFAERR REVLASVIIG
YFAIVVIGVT SVWTIKQIPV WKNTGVFWEW VIAHFPDKLA RAHTNLGIYY NKQGNEDGAM
DMFRQAIRIK EDYEPPYNLL ALAYQNRGQW EQAEKMFHDA LAVKQDAMVE NNLGLLYMQK
GDHERAETWF RKAVATNPDF AQPYNNLGLL FEKMKQPEEA ERFYKKAIET NFDLSEAHAN
LGNLYKKRKQ FDAAIVEFSI SVFLSPDNAD MHNAFAEALM AAGYLDKAEQ QLKKALHLRP
GHVSAQANLR KIHEHKGSAT
//
