ID M2Q1R9_9FIRM Unreviewed; 538 AA.
AC M2Q1R9;
DT 01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 01-MAY-2013, sequence version 1.
DT 24-JAN-2024, entry version 34.
DE RecName: Full=Single-stranded-DNA-specific exonuclease RecJ {ECO:0000256|ARBA:ARBA00019841};
GN ORFNames=HMPREF9943_00902 {ECO:0000313|EMBL:EMD16860.1};
OS Eggerthia catenaformis OT 569 = DSM 20559.
OC Bacteria; Bacillota; Erysipelotrichia; Erysipelotrichales;
OC Coprobacillaceae; Eggerthia.
OX NCBI_TaxID=999415 {ECO:0000313|EMBL:EMD16860.1, ECO:0000313|Proteomes:UP000011758};
RN [1] {ECO:0000313|EMBL:EMD16860.1, ECO:0000313|Proteomes:UP000011758}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=OT 569 {ECO:0000313|EMBL:EMD16860.1,
RC ECO:0000313|Proteomes:UP000011758};
RG The Broad Institute Genome Sequencing Platform;
RA Earl A., Ward D., Feldgarden M., Gevers D., Izard J., Blanton J.M.,
RA Mathney J., Dewhirst F.E., Young S.K., Zeng Q., Gargeya S., Fitzgerald M.,
RA Haas B., Abouelleil A., Alvarado L., Arachchi H.M., Berlin A.,
RA Chapman S.B., Gearin G., Goldberg J., Griggs A., Gujja S., Hansen M.,
RA Heiman D., Howarth C., Larimer J., Lui A., MacDonald P.J.P., McCowen C.,
RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., Roberts A.,
RA Saif S., Shea T., Sisk P., Stolte C., Sykes S., Wortman J., Nusbaum C.,
RA Birren B.;
RT "The Genome Sequence of Lactobacillus catenaformis F0143.";
RL Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the RecJ family.
CC {ECO:0000256|ARBA:ARBA00005915}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EMD16860.1}.
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DR EMBL; AGEJ01000013; EMD16860.1; -; Genomic_DNA.
DR RefSeq; WP_004802471.1; NZ_KB446647.1.
DR AlphaFoldDB; M2Q1R9; -.
DR STRING; 999415.HMPREF9943_00902; -.
DR PATRIC; fig|999415.3.peg.908; -.
DR eggNOG; COG0608; Bacteria.
DR OrthoDB; 9809852at2; -.
DR BioCyc; ECAT999415-HMP:GTTI-925-MONOMER; -.
DR Proteomes; UP000011758; Unassembled WGS sequence.
DR GO; GO:0008409; F:5'-3' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR Gene3D; 3.10.310.30; -; 1.
DR Gene3D; 3.90.1640.30; -; 1.
DR InterPro; IPR001667; DDH_dom.
DR InterPro; IPR038763; DHH_sf.
DR InterPro; IPR003156; DHHA1_dom.
DR InterPro; IPR004610; RecJ.
DR InterPro; IPR041122; RecJ_OB.
DR NCBIfam; TIGR00644; recJ; 1.
DR PANTHER; PTHR30255; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR PANTHER; PTHR30255:SF2; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR Pfam; PF01368; DHH; 1.
DR Pfam; PF02272; DHHA1; 1.
DR Pfam; PF17768; RecJ_OB; 1.
DR SUPFAM; SSF64182; DHH phosphoesterases; 1.
PE 3: Inferred from homology;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:EMD16860.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:EMD16860.1};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000011758}.
FT DOMAIN 73..205
FT /note="DDH"
FT /evidence="ECO:0000259|Pfam:PF01368"
FT DOMAIN 310..423
FT /note="DHHA1"
FT /evidence="ECO:0000259|Pfam:PF02272"
FT DOMAIN 439..536
FT /note="RecJ OB"
FT /evidence="ECO:0000259|Pfam:PF17768"
SQ SEQUENCE 538 AA; 61312 MW; D3CC6071802131BC CRC64;
MLYHKIYLEH TDDIMHDYHV NPLLAKVIEA KKMDIDTYQQ MISHRLIYHQ YDLFSEAEMA
LERIHEALDN DEKICIYGDY DCDGILATAI MVQAFKDLGK DVGYHIPNRF IDGYGLNSMR
VKQMAEKGYT LIITVDNGVK AHEAVEEANR LGIDVIITDH HTFNEEEDLP DAASIIHTKL
SADYPFKEIC GGFVAFKLAS ALTGMNDKYL YSLAAITTIS DMMPLLDENR SIVEKGLEFM
SENHYRSIEL LKGEKQPYNV TTIGFTIAPK INSFGRLPEN VNPNHLVKYF LKDTDPSYQN
KIAAYASKIN SLRQTMSDQA YRKALEIEHE KCLYYASKDV HEGIIGLIAG KYTREYERPA
LVMHYDETKQ IYRGSARGIE GFNIYKFFLK HDNLLEQFGG HAMAGGFSVS KEHFKSLHQA
LLEELKDQEF NSSQDVIVIQ KEDLTIDNVE SLSQLEPYGK SNEEPLFMIE NLTIDHFIEL
SGGKHLKMTV GNLSLLYFFN GDKKSIIASS PTHTFVGTLS INEFRGVKSI NMIIKDIL
//
