ID M2XVB3_GALSU Unreviewed; 596 AA.
AC M2XVB3;
DT 01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 01-MAY-2013, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE SubName: Full=RNA-binding protein {ECO:0000313|EMBL:EME27334.1};
GN ORFNames=Gasu_50650 {ECO:0000313|EMBL:EME27334.1};
OS Galdieria sulphuraria (Red alga).
OC Eukaryota; Rhodophyta; Bangiophyceae; Galdieriales; Galdieriaceae;
OC Galdieria.
OX NCBI_TaxID=130081 {ECO:0000313|EMBL:EME27334.1, ECO:0000313|Proteomes:UP000030680};
RN [1] {ECO:0000313|Proteomes:UP000030680}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=074W {ECO:0000313|Proteomes:UP000030680};
RX PubMed=23471408; DOI=10.1126/science.1231707;
RA Schonknecht G., Chen W.H., Ternes C.M., Barbier G.G., Shrestha R.P.,
RA Stanke M., Brautigam A., Baker B.J., Banfield J.F., Garavito R.M., Carr K.,
RA Wilkerson C., Rensing S.A., Gagneul D., Dickenson N.E., Oesterhelt C.,
RA Lercher M.J., Weber A.P.;
RT "Gene transfer from bacteria and archaea facilitated evolution of an
RT extremophilic eukaryote.";
RL Science 339:1207-1210(2013).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; KB454533; EME27334.1; -; Genomic_DNA.
DR RefSeq; XP_005703854.1; XM_005703797.1.
DR AlphaFoldDB; M2XVB3; -.
DR STRING; 130081.M2XVB3; -.
DR EnsemblPlants; EME27334; EME27334; Gasu_50650.
DR GeneID; 17086251; -.
DR Gramene; EME27334; EME27334; Gasu_50650.
DR KEGG; gsl:Gasu_50650; -.
DR eggNOG; KOG0147; Eukaryota.
DR OMA; GRDNDKG; -.
DR OrthoDB; 5480707at2759; -.
DR Proteomes; UP000030680; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR CDD; cd12283; RRM1_RBM39_like; 1.
DR CDD; cd12284; RRM2_RBM23_RBM39; 1.
DR CDD; cd12285; RRM3_RBM39_like; 1.
DR Gene3D; 3.30.70.330; -; 3.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR029123; RBM39_linker.
DR InterPro; IPR006509; RBM39_SF.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR003954; RRM_dom_euk.
DR NCBIfam; TIGR01622; SF-CC1; 1.
DR PANTHER; PTHR48036:SF6; RNA BINDING MOTIF PROTEIN 39B ISOFORM X1-RELATED; 1.
DR PANTHER; PTHR48036; SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED; 1.
DR Pfam; PF15519; RBM39linker; 1.
DR Pfam; PF00076; RRM_1; 3.
DR SMART; SM00360; RRM; 3.
DR SMART; SM00361; RRM_1; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 3.
PE 4: Predicted;
KW Phosphoprotein {ECO:0000256|ARBA:ARBA00022553};
KW Reference proteome {ECO:0000313|Proteomes:UP000030680};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 186..263
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 306..384
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 495..579
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 24..173
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 451..487
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 43..58
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 87..104
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 105..146
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 155..173
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 466..487
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 596 AA; 67244 MW; 8F36203502A25755 CRC64;
MTDNTSTIID TEAYLNQVLG LTSEKTSEKE DSLVNDNNAE SSSKSCGEKD ERKSSSSRRS
TRRSQSPLKR HKRSRSRSPS SGDSSERRRR RRRRRRRSKS PRRRRYERDR SYSPRRRYSS
RRESHSRPYS VREESKQPDE KRSRASSLDS SVNNDRSKQF RDPEEERKLK EREVDNSFPD
YERDLRTIFV WQLAQKVTEK DVYNFFSAAG KVRDIRMIID KRSGRHKGAA YVEFYYKEAI
PSAMRLAGQQ LCGYPVAIKP SEAEKNIAAE MAAREAAAAQ QARLAELEEW SGGGDTSPNS
NPLTFTKLYV GSIHFSISED DLRTIFEPFG EVISLQLHKD PETGRSRGFG FVQYKNHEDA
KKAFEQLNGL DLAGRPLKVG LATAEAQKLQ VLGAIPSGVP GTIAAQSLSS KNYAYSAYIS
ELDEGGDSGM ALSATQRTQL MQRLARGEAL ASKSSPALGG KSPGLLSSEA SPQSGTVPTR
QGYNPPLVHS ISPSTCLMLR NMFDPAQETD PNFHLEVQED VRDECISKFG PLRHIFVDKN
SAGLVYVQFE TMSDAMKAKQ GLHGRWFAGH QVIVEYISES VYYIRFPDLK KHSIQY
//
