ID M3DDI1_SPHMS Unreviewed; 1804 AA.
AC M3DDI1;
DT 01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 01-MAY-2013, sequence version 1.
DT 24-JAN-2024, entry version 41.
DE SubName: Full=Nucleic acid-binding protein {ECO:0000313|EMBL:EMF15874.1};
GN ORFNames=SEPMUDRAFT_61179 {ECO:0000313|EMBL:EMF15874.1};
OS Sphaerulina musiva (strain SO2202) (Poplar stem canker fungus) (Septoria
OS musiva).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes;
OC Dothideomycetidae; Mycosphaerellales; Mycosphaerellaceae; Sphaerulina.
OX NCBI_TaxID=692275 {ECO:0000313|EMBL:EMF15874.1, ECO:0000313|Proteomes:UP000016931};
RN [1] {ECO:0000313|EMBL:EMF15874.1, ECO:0000313|Proteomes:UP000016931}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SO2202 {ECO:0000313|EMBL:EMF15874.1,
RC ECO:0000313|Proteomes:UP000016931};
RX PubMed=23236275; DOI=10.1371/journal.ppat.1003037;
RA Ohm R.A., Feau N., Henrissat B., Schoch C.L., Horwitz B.A., Barry K.W.,
RA Condon B.J., Copeland A.C., Dhillon B., Glaser F., Hesse C.N., Kosti I.,
RA LaButti K., Lindquist E.A., Lucas S., Salamov A.A., Bradshaw R.E.,
RA Ciuffetti L., Hamelin R.C., Kema G.H.J., Lawrence C., Scott J.A.,
RA Spatafora J.W., Turgeon B.G., de Wit P.J.G.M., Zhong S., Goodwin S.B.,
RA Grigoriev I.V.;
RT "Diverse lifestyles and strategies of plant pathogenesis encoded in the
RT genomes of eighteen Dothideomycetes fungi.";
RL PLoS Pathog. 8:E1003037-E1003037(2012).
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
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DR EMBL; KB456261; EMF15874.1; -; Genomic_DNA.
DR RefSeq; XP_016763995.1; XM_016909552.1.
DR STRING; 692275.M3DDI1; -.
DR GeneID; 27906689; -.
DR eggNOG; KOG1070; Eukaryota.
DR HOGENOM; CLU_000845_0_0_1; -.
DR OMA; GQYLRAY; -.
DR OrthoDB; 167902at2759; -.
DR Proteomes; UP000016931; Unassembled WGS sequence.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR CDD; cd05702; S1_Rrp5_repeat_hs11_sc8; 1.
DR CDD; cd05703; S1_Rrp5_repeat_hs12_sc9; 1.
DR CDD; cd05693; S1_Rrp5_repeat_hs1_sc1; 1.
DR CDD; cd05697; S1_Rrp5_repeat_hs5; 1.
DR CDD; cd05698; S1_Rrp5_repeat_hs6_sc5; 1.
DR CDD; cd04461; S1_Rrp5_repeat_hs8_sc7; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 10.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR003107; HAT.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR045209; Rrp5.
DR InterPro; IPR048058; Rrp5_S1_rpt_hs11_sc8.
DR InterPro; IPR048059; Rrp5_S1_rpt_hs1_sc1.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR002792; TRAM_dom.
DR PANTHER; PTHR23270; PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5; 1.
DR PANTHER; PTHR23270:SF10; PROTEIN RRP5 HOMOLOG; 1.
DR Pfam; PF00575; S1; 5.
DR SMART; SM00386; HAT; 5.
DR SMART; SM00316; S1; 12.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 10.
DR SUPFAM; SSF48452; TPR-like; 2.
DR PROSITE; PS50126; S1; 12.
DR PROSITE; PS50926; TRAM; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000016931};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW rRNA processing {ECO:0000256|ARBA:ARBA00022552}.
FT DOMAIN 146..244
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 260..338
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 303..378
FT /note="TRAM"
FT /evidence="ECO:0000259|PROSITE:PS50926"
FT DOMAIN 438..519
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 536..611
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 632..701
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 720..793
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 815..884
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 921..997
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 1029..1100
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 1116..1185
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 1210..1279
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 1299..1371
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 1..128
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1376..1504
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1757..1777
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..44
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 75..112
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1379..1400
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1417..1431
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1468..1489
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1490..1504
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1804 AA; 197780 MW; 8E498DEF5A91E9EC CRC64;
MAPVKRKAVT DERPSKKAKP ADVKERNAKE KKERLARGGA EPGEKKAPLK SILQQEEKAF
PRGGGSVLTP IERKQIEAQA ERDVLFEQET GQKAEAKDDD GELFDKVDSA PAKKKRKTTR
KGDGLPQVEG SGVKISGLSY KTLAVGSVVL GRVTAITGRD VALALPNNLT GYVPITAVSE
RLTARIERML DDAKSGADED DEDDEDIDLK QLFHVGQWLR ATVTSTGTDP AEGKSKKHIE
LSLDPTTVNG GLPEDNVVVN SVVQAAVRSV EDHGLIMDLG LSDESVKGFV SKKELGYAYD
LDKVQEGQVM LCLVTGKGSN GKVLKISPDP SRMSLALGDK KLPTISDAPS VDAILPGTAV
DVLITESGPS GVVGKIMGML DVTADAIHSQ AIGLEEKDMS KKYKVGSKTH ARIVFAIPED
DGARRTQAAE LGQLLPMSSV VEDAKITQVS QNKGLYLKLS AKHGRDERSV TAFAHISQIS
DKRIESLSST SGPYTIDSAH KVRIIGYSPI DNIYYVSLKQ SVLDQAFLRL DDLTVGAVVN
GTVDKIILGG ATGLTGILVK LSDNITGLVP EQHISDAQLK NPERKYREGF PVKARILSVD
TEKRHVRLTL KKQLVDDANE EIWKAYQGLQ PGMESKGTII KLHPNGAVVQ FYGPVRAWLP
VAEMSETFIE RPEQHFRSGQ TVRVKIVSVS PDTEEMKVTC KDHVAFGADQ EQAWDKVAGG
QLVSGTVTEK SAESISLDLE SGLRGMMRLT HFVDGSLAKA EKEAKRVRVG QKLKHLLVLD
KIDRSQTVML SNKPSLVEDA KAGNLISTFS DVKQGTKVHG FVRNTTSDAI FVEFANGIVG
LLPKSQILAE ALDKPDFGVR KDQTLNVWVM DTDVSAKRFR LTMREQAATA EQSSNPKASI
DDALSKPIDP ALKSLSDIEP GKVTKARIAS IRATQINVRL ADNVQGRVDV SEVFDSWDEI
SNKAAPLQSF KQNDLIDVKV LGIHDARNHR FLPFSHRQGK VPVFELSAKK SRVQKDDKSL
LDLESVKPGS SQLAFVNNHA ENCVWVNLSP NVRGRVALMD LSDDVGQLQN VENRFRIGCA
LRVNVKAVDI SAGRLDLTAK QDNASTPLAL KDLSPGMVLP ARVIKATERA VSVELAKNLV
AHVPLVELSD DYDSINLMQY SKNDIVRACV ISVDAPNKRA FVSLRPSKVL SSSLPVKDAQ
ISNVSQLKAA DIVRGFVKKV ADKGVFVSLG ADVDALVRIS DLSDQYVKEW RSIYVVDQLV
KGRVLSVDTD AKQVQLSLKQ SHVDGNYEPP LGITDLEAGM TVTGKVRKVE DFGAFIDIDN
TQPRLSGLCH RSEVAARRTE DVRKLYSAGD VVKAKVLKVD VENRKISLGL KASYFANETD
DGDDEDEDSE DEDVDMDGGV ELSNDSDGGV EIDRDVQDAD SEADVEDMMD VDDEPAKASG
GLKTSGFNWE GEDLDAGTNG AAYESEPETV TTKKKKRKSE IKEDLTGDLD KNGPQSNSDF
ERQLLGQPNN SGLWIQYMAF QLRLSEIQQA RNIAERALRT INIRESDEKL NIWIALLNLE
VEYGDDDGVE EAFKNAVQVQ DPLEMHEKLA SIYIDSGRHA KADGIFERMI ANKTFRASPE
VWLNYATFLL ETLGNADRAR ALLTKALHSV PTNEHRLLTA KFAALEFRSV NGDAERGRTI
FEGLMSEWSK WSSGWDMWVD IERSRISTQS SDDAKMEAVE KTRELFERIV KLPMKKRRAK
FVFKKWLDFE NKEGAAQYAA GTSKKGSKKT GGSQAERVTV LAREYAQKLE DKKAGGGDGE
DDDE
//
