ID M3WQA3_FELCA Unreviewed; 246 AA.
AC M3WQA3;
DT 01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2019, sequence version 4.
DT 24-JAN-2024, entry version 58.
DE SubName: Full=TNF receptor superfamily member 13C {ECO:0000313|Ensembl:ENSFCAP00000016533.4};
GN Name=TNFRSF13C {ECO:0000313|Ensembl:ENSFCAP00000016533.4,
GN ECO:0000313|VGNC:VGNC:66405};
OS Felis catus (Cat) (Felis silvestris catus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis.
OX NCBI_TaxID=9685 {ECO:0000313|Ensembl:ENSFCAP00000016533.4, ECO:0000313|Proteomes:UP000011712};
RN [1] {ECO:0000313|Ensembl:ENSFCAP00000016533.4, ECO:0000313|Proteomes:UP000011712}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Abyssinian {ECO:0000313|Ensembl:ENSFCAP00000016533.4,
RC ECO:0000313|Proteomes:UP000011712};
RX PubMed=17975172; DOI=10.1101/gr.6380007;
RA Pontius J.U., Mullikin J.C., Smith D.R., Lindblad-Toh K., Gnerre S.,
RA Clamp M., Chang J., Stephens R., Neelam B., Volfovsky N., Schaffer A.A.,
RA Agarwala R., Narfstrom K., Murphy W.J., Giger U., Roca A.L., Antunes A.,
RA Menotti-Raymond M., Yuhki N., Pecon-Slattery J., Johnson W.E., Bourque G.,
RA Tesler G., O'Brien S.J.;
RT "Initial sequence and comparative analysis of the cat genome.";
RL Genome Res. 17:1675-1689(2007).
RN [2] {ECO:0000313|Ensembl:ENSFCAP00000016533.4, ECO:0000313|Proteomes:UP000011712}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Abyssinian {ECO:0000313|Ensembl:ENSFCAP00000016533.4,
RC ECO:0000313|Proteomes:UP000011712};
RA Hillier L.W., Warren W., Obrien S., Wilson R.K.;
RT "Sequence assembly of the Felis catus genome version 6.2.";
RL Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|Ensembl:ENSFCAP00000016533.4}
RP IDENTIFICATION.
RC STRAIN=breed Abyssinian {ECO:0000313|Ensembl:ENSFCAP00000016533.4};
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
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DR EMBL; AANG04001989; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; M3WQA3; -.
DR Ensembl; ENSFCAT00000029715.4; ENSFCAP00000016533.4; ENSFCAG00000025989.4.
DR VGNC; VGNC:66405; TNFRSF13C.
DR eggNOG; ENOG502T201; Eukaryota.
DR GeneTree; ENSGT00940000154485; -.
DR HOGENOM; CLU_131020_0_0_1; -.
DR Proteomes; UP000011712; Chromosome B4.
DR Bgee; ENSFCAG00000025989; Expressed in spleen and 9 other cell types or tissues.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0038023; F:signaling receptor activity; IEA:InterPro.
DR GO; GO:0033209; P:tumor necrosis factor-mediated signaling pathway; IEA:InterPro.
DR InterPro; IPR022338; TNFR_13C.
DR InterPro; IPR043521; TNFR_13C/17.
DR InterPro; IPR015336; TNFR_13C_TALL-1-bd.
DR PANTHER; PTHR20437; TUMOR NECROSIS FACTOR RECEPTOR SUBFAMILY MEMBER 13/17; 1.
DR PANTHER; PTHR20437:SF2; TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 13C; 1.
DR Pfam; PF09256; BaffR-Tall_bind; 1.
DR PRINTS; PR01964; TNFACTORR13C.
DR SUPFAM; SSF57586; TNF receptor-like; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000011712};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 141..164
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 76..105
FT /note="Tumour necrosis factor receptor 13C TALL-1 binding"
FT /evidence="ECO:0000259|Pfam:PF09256"
FT REGION 1..39
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 52..72
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 104..129
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 174..246
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 201..221
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 231..246
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 246 AA; 25892 MW; 7AB5D2849B733A92 CRC64;
MEEPQVEEKV WGAGPRGPGG EWSHPSRREG GAQWVGPSRF PPLAAEARLS PGCVRGSMGS
RRRGARSLRG REGAAPTKCV VDKCFDPLVR KCVDCRLLRT PEPGPAGPGS LAPGTALQPQ
ESVGAGAAAE TEAEAALPLP ALLFGAPALL GLALALVLVG LLSWRWRRRR RLRAAAPPGD
PDPHPHEPLD DVIIHPPKPL DATAPVWPPP REDPANTPPA HSVPVPATEL GSTELVTTKT
AGPEQQ
//
